Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 AC136759.1-202ENST00000530858 2194 ntBASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 SCARNA21-201ENST00000517026 139 ntBASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 MIR4754-201ENST00000582477 89 ntBASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 AC011491.1-203ENST00000637688 543 ntBASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 REXO1L4P-201ENST00000605109 1937 ntBASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMFBP1Q8TBY8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 AL008718.2-201ENST00000609206 1313 ntBASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 AC026316.1-201ENST00000398900 414 ntBASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 RN7SL181P-201ENST00000462921 277 ntBASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 AC132192.2-201ENST00000596206 1147 ntBASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 RN7SL736P-201ENST00000613111 269 ntBASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PMFBP1Q8TBY8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 FAM90A7P-201ENST00000382628 1395 ntBASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 FAM90A23P-201ENST00000400136 1395 ntBASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 CFL1-206ENST00000527344 962 ntTSL 2 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 NEU3-205ENST00000531619 582 ntTSL 5 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 AC005962.1-201ENST00000584100 773 ntBASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PMFBP1Q8TBY8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms