Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RAD52-202ENST00000358495 2710 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 UBR4-203ENST00000375225 1533 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 PLXNB2-213ENST00000610984 3443 ntTSL 5 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 SFTPB-207ENST00000519937 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 WDR47-202ENST00000361054 4115 ntTSL 5 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 HLA-DQB1-201ENST00000374943 1656 ntBASIC9.11□□□□□ -0.95
SVIPQ8NHG7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 MERTK-207ENST00000616902 3104 ntTSL 5 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 CASP7-212ENST00000621607 2378 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 AL121578.1-201ENST00000428051 892 ntBASIC9.11□□□□□ -0.95
SVIPQ8NHG7 LINC01718-201ENST00000441660 391 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 PAQR9-AS1-201ENST00000478823 610 ntTSL 3 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 DPT-201ENST00000367817 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 AC015909.3-201ENST00000572855 1794 ntBASIC9.11□□□□□ -0.95
SVIPQ8NHG7 ATP2B3-205ENST00000393842 4064 ntTSL 5 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 AC004623.1-201ENST00000624592 2127 ntBASIC9.11□□□□□ -0.95
SVIPQ8NHG7 AC068790.9-201ENST00000621669 2838 ntBASIC9.11□□□□□ -0.95
SVIPQ8NHG7 SLC22A11-201ENST00000301891 3860 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 AL031666.2-201ENST00000599904 2253 ntBASIC9.11□□□□□ -0.95
SVIPQ8NHG7 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 UBA7-201ENST00000333486 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 SP140-201ENST00000343805 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 IL20RB-201ENST00000329582 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 ANKRD46-206ENST00000520552 1686 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 LINC02192-201ENST00000570024 1325 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 JAML-201ENST00000292067 1959 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 METTL16-201ENST00000263092 5711 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 LINC01254-201ENST00000566225 2908 ntBASIC9.1□□□□□ -0.95
SVIPQ8NHG7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 RGPD4-AS1-202ENST00000457647 1792 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 TFAMP1-201ENST00000412727 736 ntBASIC9.1□□□□□ -0.95
SVIPQ8NHG7 ANP32AP1-201ENST00000559548 737 ntBASIC9.1□□□□□ -0.95
SVIPQ8NHG7 AC007066.2-202ENST00000566531 914 ntBASIC9.1□□□□□ -0.95
SVIPQ8NHG7 AC005070.1-201ENST00000603744 365 ntBASIC9.1□□□□□ -0.95
SVIPQ8NHG7 AC009950.2-201ENST00000636548 183 ntBASIC9.1□□□□□ -0.95
SVIPQ8NHG7 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 AL023802.1-201ENST00000447372 3775 ntTSL 2 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 SSRP1-201ENST00000278412 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
SVIPQ8NHG7 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms