Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 AC068760.1-201ENST00000493579 1953 ntBASIC11.34□□□□□ -0.59
NUP35Q8NFH5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 AC012617.1-204ENST00000586340 2305 ntBASIC11.34□□□□□ -0.59
NUP35Q8NFH5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
NUP35Q8NFH5 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 AC118758.2-201ENST00000614242 2813 ntBASIC11.33□□□□□ -0.6
NUP35Q8NFH5 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.33□□□□□ -0.6
NUP35Q8NFH5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 AL121772.3-201ENST00000610840 674 ntBASIC11.33□□□□□ -0.6
NUP35Q8NFH5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 AL645728.2-202ENST00000641679 227 ntBASIC11.33□□□□□ -0.6
NUP35Q8NFH5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.33□□□□□ -0.6
NUP35Q8NFH5 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.32□□□□□ -0.6
NUP35Q8NFH5 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms