Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 AC140479.7-201ENST00000636301 2332 ntBASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 VDAC1P7-201ENST00000462417 847 ntBASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 AC055876.2-201ENST00000531834 546 ntBASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 AC009118.2-201ENST00000613275 655 ntBASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 AC018529.2-202ENST00000611482 3087 ntBASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 AC005912.2-201ENST00000619492 2400 ntBASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LSMEM1Q8N8F7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.19
LSMEM1Q8N8F7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
LSMEM1Q8N8F7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.9□□□□□ -0.19
LSMEM1Q8N8F7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.9□□□□□ -0.19
LSMEM1Q8N8F7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
LSMEM1Q8N8F7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LSMEM1Q8N8F7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 SLC7A15P-201ENST00000424028 1363 ntBASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 CYMP-203ENST00000474680 1263 ntBASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LSMEM1Q8N8F7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms