Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 AHCYP2-201ENST00000430630 1300 ntBASIC14.08□□□□□ -0.16
BEST3Q8N1M1 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BEST3Q8N1M1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AC105250.1-201ENST00000509378 2057 ntBASIC14.07□□□□□ -0.16
BEST3Q8N1M1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 MIR1202-201ENST00000408529 83 ntBASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 RPL13AP20-201ENST00000459725 609 ntBASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AC022494.1-201ENST00000466044 728 ntBASIC14.07□□□□□ -0.16
BEST3Q8N1M1 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 DUX4L45-201ENST00000566406 1057 ntBASIC14.07□□□□□ -0.16
BEST3Q8N1M1 RN7SL560P-201ENST00000577943 264 ntBASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.07□□□□□ -0.16
BEST3Q8N1M1 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 KRT8P14-201ENST00000414254 1442 ntBASIC14.07□□□□□ -0.16
BEST3Q8N1M1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST3Q8N1M1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 TPM3P8-201ENST00000330554 643 ntBASIC14.06□□□□□ -0.16
BEST3Q8N1M1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
BEST3Q8N1M1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms