Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBR1Q8IWV7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBR1Q8IWV7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
UBR1Q8IWV7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC20.71■□□□□ 0.91
UBR1Q8IWV7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC20.71■□□□□ 0.91
UBR1Q8IWV7 LINC00528-201ENST00000600723 2160 ntBASIC20.71■□□□□ 0.91
UBR1Q8IWV7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBR1Q8IWV7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
UBR1Q8IWV7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBR1Q8IWV7 WASH3P-207ENST00000560956 1394 ntBASIC20.71■□□□□ 0.91
UBR1Q8IWV7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
UBR1Q8IWV7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
UBR1Q8IWV7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 F11R-204ENST00000537746 1245 ntTSL 2 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 MIR5001-201ENST00000580185 100 ntBASIC20.7■□□□□ 0.9
UBR1Q8IWV7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 AC019109.1-201ENST00000401725 1874 ntBASIC20.7■□□□□ 0.9
UBR1Q8IWV7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 ENPP7P8-202ENST00000527856 1345 ntBASIC20.7■□□□□ 0.9
UBR1Q8IWV7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 NME6-208ENST00000435684 599 ntTSL 2 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 RPL3P5-201ENST00000441645 1232 ntBASIC20.7■□□□□ 0.9
UBR1Q8IWV7 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 NDUFB10P1-201ENST00000567319 521 ntBASIC20.7■□□□□ 0.9
UBR1Q8IWV7 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC20.7■□□□□ 0.9
UBR1Q8IWV7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 HNRNPA1P58-201ENST00000403629 610 ntBASIC20.69■□□□□ 0.9
UBR1Q8IWV7 GDNF-207ENST00000515058 764 ntTSL 5 BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 AC004554.1-201ENST00000422830 1468 ntBASIC20.69■□□□□ 0.9
UBR1Q8IWV7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 LINC02199-201ENST00000506655 2702 ntBASIC20.69■□□□□ 0.9
UBR1Q8IWV7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
UBR1Q8IWV7 AP003680.1-201ENST00000598970 3660 ntBASIC20.69■□□□□ 0.9
UBR1Q8IWV7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 PCDHGB8P-201ENST00000502926 1973 ntBASIC20.68■□□□□ 0.9
UBR1Q8IWV7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 AC020658.6-201ENST00000623564 1870 ntBASIC20.68■□□□□ 0.9
UBR1Q8IWV7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 AC063952.3-201ENST00000467756 308 ntBASIC20.68■□□□□ 0.9
UBR1Q8IWV7 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 FOXN3-AS2-201ENST00000554071 1262 ntBASIC20.68■□□□□ 0.9
UBR1Q8IWV7 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
UBR1Q8IWV7 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms