Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 KRT8P14-201ENST00000414254 1442 ntBASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 KRT8P22-201ENST00000562317 1415 ntBASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 SOCS2P1-201ENST00000417727 557 ntBASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 SPTLC1P1-201ENST00000447199 261 ntBASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 AP001582.1-201ENST00000525856 295 ntBASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 AC124283.3-201ENST00000570869 594 ntBASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDKL3Q8IVW4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 UGT1A2P-201ENST00000454886 866 ntBASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 AC092552.1-201ENST00000547243 906 ntBASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 AC123567.1-201ENST00000548294 1261 ntBASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 AC008761.3-201ENST00000624803 892 ntBASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDKL3Q8IVW4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKL3Q8IVW4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKL3Q8IVW4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKL3Q8IVW4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKL3Q8IVW4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKL3Q8IVW4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms