Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 MIR193BHG-211ENST00000641433 5365 ntBASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CROCCP3Q8IVE0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 AC018892.3-201ENST00000623986 2499 ntBASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 KRT18P27-201ENST00000427733 1299 ntBASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 AC024267.1-201ENST00000582320 895 ntBASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.74□□□□□ -0.21
CROCCP3Q8IVE0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 PCDHA5-203ENST00000614258 4248 ntBASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 MIR497HG-202ENST00000572453 3838 ntBASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 FGFR3P6-201ENST00000457012 610 ntBASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 AL450472.2-201ENST00000603663 1156 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms