Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 AC112482.1-201ENST00000492080 688 ntBASIC13.73□□□□□ -0.21
SHFQ7M4L6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 AL512356.2-201ENST00000546955 174 ntBASIC13.73□□□□□ -0.21
SHFQ7M4L6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 AL033527.5-202ENST00000641632 1098 ntBASIC13.73□□□□□ -0.21
SHFQ7M4L6 AL645728.2-202ENST00000641679 227 ntBASIC13.73□□□□□ -0.21
SHFQ7M4L6 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 AC007787.1-201ENST00000588095 1583 ntBASIC13.73□□□□□ -0.21
SHFQ7M4L6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SHFQ7M4L6 AC126335.2-201ENST00000623362 4637 ntBASIC13.73□□□□□ -0.21
SHFQ7M4L6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.73□□□□□ -0.21
SHFQ7M4L6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 AC211486.1-202ENST00000416371 468 ntBASIC13.72□□□□□ -0.21
SHFQ7M4L6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 UPF3AP3-201ENST00000420996 769 ntBASIC13.72□□□□□ -0.21
SHFQ7M4L6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 AC211476.1-201ENST00000503899 468 ntBASIC13.72□□□□□ -0.21
SHFQ7M4L6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.72□□□□□ -0.21
SHFQ7M4L6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SHFQ7M4L6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.72□□□□□ -0.21
SHFQ7M4L6 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 AC092135.3-201ENST00000624151 1846 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms