Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.1■□□□□ 0.17
CCNI2Q6ZMN8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.1■□□□□ 0.17
CCNI2Q6ZMN8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.1■□□□□ 0.17
CCNI2Q6ZMN8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CCNI2Q6ZMN8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCNI2Q6ZMN8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCNI2Q6ZMN8 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 CYP4F24P-201ENST00000586049 1580 ntBASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 MIR1909-201ENST00000411312 80 ntBASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 AC136604.1-201ENST00000418535 575 ntBASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 AL138918.1-201ENST00000568306 659 ntBASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 AC140912.1-201ENST00000577171 1054 ntBASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 AC018529.1-201ENST00000613063 361 ntBASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 MIR6805-201ENST00000615055 62 ntBASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCNI2Q6ZMN8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCNI2Q6ZMN8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCNI2Q6ZMN8 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.08■□□□□ 0.17
CCNI2Q6ZMN8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.08■□□□□ 0.17
CCNI2Q6ZMN8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.08■□□□□ 0.17
CCNI2Q6ZMN8 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 ACA64.2-201ENST00000459014 129 ntBASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 HLA-V-204ENST00000476601 1289 ntBASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 AL132655.2-201ENST00000596276 594 ntBASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 IGHV3-72-202ENST00000621503 303 ntBASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCNI2Q6ZMN8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCNI2Q6ZMN8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms