Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC021097.1-201ENST00000607902 574 ntBASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXR1Q6PIV2 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 NIFKP4-201ENST00000567275 1192 ntBASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 AC018529.2-202ENST00000611482 3087 ntBASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXR1Q6PIV2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 CICP16-201ENST00000502609 2813 ntBASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 AC142381.1-201ENST00000426099 345 ntBASIC15.84■□□□□ 0.13
FOXR1Q6PIV2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms