Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 AL157414.3-201ENST00000624276 1954 ntBASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 AL139094.1-201ENST00000405549 1188 ntBASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 NUS1P3-201ENST00000423502 862 ntBASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 AC133552.6-201ENST00000613406 534 ntBASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 COX11-210ENST00000639671 696 ntBASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 CICP14-201ENST00000629111 2732 ntBASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.78■□□□□ 0.12
RFWD3Q6PCD5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 AL390755.1-201ENST00000623716 2027 ntBASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 AC023024.2-201ENST00000623561 1993 ntBASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 AC104457.1-201ENST00000401024 814 ntBASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 ACTBP8-201ENST00000403258 1108 ntBASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 KRT223P-202ENST00000449164 1292 ntBASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RFWD3Q6PCD5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFWD3Q6PCD5 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.77■□□□□ 0.11
RFWD3Q6PCD5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.77■□□□□ 0.11
RFWD3Q6PCD5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
RFWD3Q6PCD5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.77■□□□□ 0.11
RFWD3Q6PCD5 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RFWD3Q6PCD5 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RFWD3Q6PCD5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms