Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 AC107890.1-201ENST00000422478 521 ntBASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 AC069120.2-201ENST00000524091 540 ntBASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 AC015911.4-201ENST00000588022 1070 ntBASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM53Q6P2H8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 AL645939.2-201ENST00000427340 991 ntBASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 SERBP1P3-201ENST00000459980 809 ntBASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 BANF1P1-201ENST00000553684 263 ntBASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 AC140878.1-201ENST00000565277 250 ntBASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM53Q6P2H8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms