Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.28□□□□□ -0.12
LPCAT4Q643R3 RNA5SP410-201ENST00000516285 106 ntBASIC14.28□□□□□ -0.12
LPCAT4Q643R3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 AC105339.3-201ENST00000560043 636 ntBASIC14.28□□□□□ -0.12
LPCAT4Q643R3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 PRELID1P1-202ENST00000567272 903 ntBASIC14.28□□□□□ -0.12
LPCAT4Q643R3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 MIR4751-201ENST00000578027 74 ntBASIC14.28□□□□□ -0.12
LPCAT4Q643R3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LPCAT4Q643R3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 AC020910.6-201ENST00000623084 1459 ntBASIC14.27□□□□□ -0.12
LPCAT4Q643R3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LPCAT4Q643R3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 IGLL3P-201ENST00000412472 434 ntBASIC14.27□□□□□ -0.13
LPCAT4Q643R3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 AC004945.1-201ENST00000416738 983 ntBASIC14.27□□□□□ -0.13
LPCAT4Q643R3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 AC140658.5-201ENST00000438532 169 ntBASIC14.27□□□□□ -0.13
LPCAT4Q643R3 SAPCD2P3-201ENST00000455031 850 ntBASIC14.27□□□□□ -0.13
LPCAT4Q643R3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LPCAT4Q643R3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms