Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC020907.1-201ENST00000616460 1350 ntBASIC17.29■□□□□ 0.36
USH1GQ495M9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
USH1GQ495M9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.29■□□□□ 0.36
USH1GQ495M9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.29■□□□□ 0.36
USH1GQ495M9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 AC079178.1-201ENST00000420915 656 ntBASIC17.29■□□□□ 0.36
USH1GQ495M9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.29■□□□□ 0.36
USH1GQ495M9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.29■□□□□ 0.36
USH1GQ495M9 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.29■□□□□ 0.36
USH1GQ495M9 ZNF767P-206ENST00000513792 565 ntBASIC17.29■□□□□ 0.36
USH1GQ495M9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.29■□□□□ 0.36
USH1GQ495M9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.29■□□□□ 0.36
USH1GQ495M9 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
USH1GQ495M9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.29■□□□□ 0.36
USH1GQ495M9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
USH1GQ495M9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
USH1GQ495M9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.29■□□□□ 0.36
USH1GQ495M9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.28■□□□□ 0.36
USH1GQ495M9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.28■□□□□ 0.36
USH1GQ495M9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
USH1GQ495M9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
USH1GQ495M9 AC004945.1-201ENST00000416738 983 ntBASIC17.28■□□□□ 0.36
USH1GQ495M9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.28■□□□□ 0.36
USH1GQ495M9 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.28■□□□□ 0.36
USH1GQ495M9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.28■□□□□ 0.36
USH1GQ495M9 AP001002.3-201ENST00000623482 206 ntBASIC17.28■□□□□ 0.36
USH1GQ495M9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
USH1GQ495M9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.28■□□□□ 0.36
USH1GQ495M9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.28■□□□□ 0.36
USH1GQ495M9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USH1GQ495M9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.28■□□□□ 0.36
USH1GQ495M9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
USH1GQ495M9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
USH1GQ495M9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.27■□□□□ 0.36
USH1GQ495M9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.27■□□□□ 0.36
USH1GQ495M9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.27■□□□□ 0.36
USH1GQ495M9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.27■□□□□ 0.36
USH1GQ495M9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.27■□□□□ 0.36
USH1GQ495M9 AL136309.1-201ENST00000403917 691 ntBASIC17.27■□□□□ 0.36
USH1GQ495M9 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
USH1GQ495M9 RN7SKP175-201ENST00000408472 289 ntBASIC17.27■□□□□ 0.36
USH1GQ495M9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.27■□□□□ 0.36
USH1GQ495M9 AC006033.1-201ENST00000440505 426 ntBASIC17.27■□□□□ 0.36
USH1GQ495M9 CHMP1AP1-201ENST00000445563 662 ntBASIC17.27■□□□□ 0.36
USH1GQ495M9 HSPB1P2-201ENST00000448722 546 ntBASIC17.27■□□□□ 0.36
USH1GQ495M9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.27■□□□□ 0.36
USH1GQ495M9 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.27■□□□□ 0.36
USH1GQ495M9 AL022328.3-201ENST00000607943 679 ntBASIC17.27■□□□□ 0.36
USH1GQ495M9 AC244157.2-201ENST00000616239 1006 ntBASIC17.27■□□□□ 0.36
USH1GQ495M9 AL008638.5-201ENST00000623814 1298 ntBASIC17.27■□□□□ 0.36
USH1GQ495M9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.27■□□□□ 0.36
USH1GQ495M9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
USH1GQ495M9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USH1GQ495M9 AP000593.2-201ENST00000542775 1433 ntBASIC17.27■□□□□ 0.35
USH1GQ495M9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
USH1GQ495M9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
USH1GQ495M9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms