Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 AC114501.2-201ENST00000439631 535 ntBASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 AC104989.1-201ENST00000519711 778 ntBASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 MIR4313-201ENST00000580760 101 ntBASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 MIR4259-201ENST00000584466 101 ntBASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 LINC00528-201ENST00000600723 2160 ntBASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRFAM7AQ494W8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CHRFAM7AQ494W8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CHRFAM7AQ494W8 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CHRFAM7AQ494W8 LINC00552-201ENST00000625151 2579 ntBASIC13.33□□□□□ -0.27
CHRFAM7AQ494W8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
CHRFAM7AQ494W8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CHRFAM7AQ494W8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 BNIP3P1-202ENST00000550043 1585 ntBASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 AL691432.1-201ENST00000596308 1422 ntBASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 SDHAP3-202ENST00000515467 728 ntBASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 BANF1P1-201ENST00000553684 263 ntBASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 AL512361.1-201ENST00000554200 418 ntBASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 AC015936.2-201ENST00000593177 259 ntBASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 SRD5A3P1-201ENST00000603021 949 ntBASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 MIR6775-201ENST00000617557 69 ntBASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHRFAM7AQ494W8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHRFAM7AQ494W8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms