Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.09■□□□□ 0.49
RFX7Q2KHR2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.09■□□□□ 0.49
RFX7Q2KHR2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 ACTG1P17-201ENST00000558391 1119 ntBASIC18.09■□□□□ 0.49
RFX7Q2KHR2 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 AC011270.2-201ENST00000624293 2550 ntBASIC18.09■□□□□ 0.49
RFX7Q2KHR2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX7Q2KHR2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 AC018529.2-202ENST00000611482 3087 ntBASIC18.08■□□□□ 0.49
RFX7Q2KHR2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 HIST2H2BC-201ENST00000498492 580 ntBASIC18.08■□□□□ 0.49
RFX7Q2KHR2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX7Q2KHR2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 SALL4P5-201ENST00000419001 1760 ntBASIC18.08■□□□□ 0.48
RFX7Q2KHR2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX7Q2KHR2 AC138028.6-201ENST00000616106 1482 ntBASIC18.07■□□□□ 0.48
RFX7Q2KHR2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 AL136309.1-201ENST00000403917 691 ntBASIC18.07■□□□□ 0.48
RFX7Q2KHR2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 AC005730.2-201ENST00000564549 1184 ntBASIC18.07■□□□□ 0.48
RFX7Q2KHR2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 AC084346.2-201ENST00000607097 949 ntBASIC18.07■□□□□ 0.48
RFX7Q2KHR2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX7Q2KHR2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms