Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.11□□□□□ -0.15
CD47Q08722 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD47Q08722 MIR1233-2-201ENST00000408138 82 ntBASIC14.11□□□□□ -0.15
CD47Q08722 MIR1233-1-201ENST00000408722 82 ntBASIC14.11□□□□□ -0.15
CD47Q08722 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.11□□□□□ -0.15
CD47Q08722 AZGP1P1-201ENST00000411909 902 ntBASIC14.11□□□□□ -0.15
CD47Q08722 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CD47Q08722 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.11□□□□□ -0.15
CD47Q08722 AP006288.1-201ENST00000446065 395 ntBASIC14.11□□□□□ -0.15
CD47Q08722 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.11□□□□□ -0.15
CD47Q08722 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.11□□□□□ -0.15
CD47Q08722 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.11□□□□□ -0.15
CD47Q08722 BANF1P1-201ENST00000553684 263 ntBASIC14.11□□□□□ -0.15
CD47Q08722 MIR4453-201ENST00000584019 89 ntBASIC14.11□□□□□ -0.15
CD47Q08722 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.11□□□□□ -0.15
CD47Q08722 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.11□□□□□ -0.15
CD47Q08722 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CD47Q08722 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.11□□□□□ -0.15
CD47Q08722 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD47Q08722 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.11□□□□□ -0.15
CD47Q08722 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.11□□□□□ -0.15
CD47Q08722 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.11□□□□□ -0.15
CD47Q08722 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD47Q08722 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CD47Q08722 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
CD47Q08722 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
CD47Q08722 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 AC055811.4-201ENST00000624039 1754 ntBASIC14.1□□□□□ -0.15
CD47Q08722 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CD47Q08722 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.1□□□□□ -0.15
CD47Q08722 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.1□□□□□ -0.15
CD47Q08722 RN7SL828P-201ENST00000607615 303 ntBASIC14.1□□□□□ -0.15
CD47Q08722 AP001059.3-201ENST00000619053 235 ntBASIC14.1□□□□□ -0.15
CD47Q08722 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.1□□□□□ -0.15
CD47Q08722 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.1□□□□□ -0.15
CD47Q08722 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.1□□□□□ -0.15
CD47Q08722 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CD47Q08722 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 PPT1-213ENST00000641319 2388 ntBASIC14.1□□□□□ -0.15
CD47Q08722 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
CD47Q08722 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CD47Q08722 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD47Q08722 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.1□□□□□ -0.15
CD47Q08722 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
CD47Q08722 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.09□□□□□ -0.15
CD47Q08722 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.09□□□□□ -0.15
CD47Q08722 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CD47Q08722 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.09□□□□□ -0.15
CD47Q08722 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CD47Q08722 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms