Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LTBQ06643 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LTBQ06643 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LTBQ06643 AC007686.3-201ENST00000619017 3487 ntBASIC13.85□□□□□ -0.19
LTBQ06643 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LTBQ06643 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LTBQ06643 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LTBQ06643 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.85□□□□□ -0.19
LTBQ06643 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
LTBQ06643 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LTBQ06643 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.85□□□□□ -0.19
LTBQ06643 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
LTBQ06643 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 AC087499.6-201ENST00000411576 835 ntBASIC13.84□□□□□ -0.19
LTBQ06643 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.84□□□□□ -0.19
LTBQ06643 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.84□□□□□ -0.19
LTBQ06643 AC099568.2-201ENST00000609194 695 ntBASIC13.84□□□□□ -0.19
LTBQ06643 AC133552.6-201ENST00000613406 534 ntBASIC13.84□□□□□ -0.19
LTBQ06643 MIR8072-201ENST00000614241 80 ntBASIC13.84□□□□□ -0.19
LTBQ06643 GPR182-203ENST00000622922 591 ntBASIC13.84□□□□□ -0.19
LTBQ06643 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LTBQ06643 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LTBQ06643 CICP14-201ENST00000629111 2732 ntBASIC13.84□□□□□ -0.19
LTBQ06643 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LTBQ06643 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.83□□□□□ -0.19
LTBQ06643 AC007787.1-201ENST00000588095 1583 ntBASIC13.83□□□□□ -0.19
LTBQ06643 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
LTBQ06643 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LTBQ06643 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.83□□□□□ -0.19
LTBQ06643 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LTBQ06643 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LTBQ06643 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LTBQ06643 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LTBQ06643 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
LTBQ06643 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.83□□□□□ -0.2
LTBQ06643 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.83□□□□□ -0.2
LTBQ06643 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.83□□□□□ -0.2
LTBQ06643 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.83□□□□□ -0.2
LTBQ06643 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.83□□□□□ -0.2
LTBQ06643 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.83□□□□□ -0.2
LTBQ06643 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.83□□□□□ -0.2
LTBQ06643 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.83□□□□□ -0.2
LTBQ06643 AC026410.3-201ENST00000514280 936 ntBASIC13.83□□□□□ -0.2
LTBQ06643 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.83□□□□□ -0.2
LTBQ06643 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
LTBQ06643 AP005482.1-201ENST00000563722 1273 ntBASIC13.83□□□□□ -0.2
LTBQ06643 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.83□□□□□ -0.2
LTBQ06643 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.83□□□□□ -0.2
LTBQ06643 MIR4259-201ENST00000584466 101 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms