Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.8□□□□□ -0.36
SSBP1Q04837 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SSBP1Q04837 AC015922.1-201ENST00000421102 1152 ntBASIC12.8□□□□□ -0.36
SSBP1Q04837 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.8□□□□□ -0.36
SSBP1Q04837 UPK3BP1-201ENST00000428678 509 ntBASIC12.8□□□□□ -0.36
SSBP1Q04837 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.8□□□□□ -0.36
SSBP1Q04837 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.8□□□□□ -0.36
SSBP1Q04837 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 AC034105.1-201ENST00000563488 319 ntBASIC12.8□□□□□ -0.36
SSBP1Q04837 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.8□□□□□ -0.36
SSBP1Q04837 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SSBP1Q04837 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SSBP1Q04837 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SSBP1Q04837 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SSBP1Q04837 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SSBP1Q04837 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 SPCS2P4-201ENST00000436160 681 ntBASIC12.79□□□□□ -0.36
SSBP1Q04837 FAM210CP-201ENST00000445714 574 ntBASIC12.79□□□□□ -0.36
SSBP1Q04837 SPDYE11-202ENST00000450699 704 ntBASIC12.79□□□□□ -0.36
SSBP1Q04837 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.79□□□□□ -0.36
SSBP1Q04837 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP1Q04837 SPDYE9P-201ENST00000570642 692 ntBASIC12.79□□□□□ -0.36
SSBP1Q04837 AL049840.3-201ENST00000602669 611 ntBASIC12.79□□□□□ -0.36
SSBP1Q04837 SPDYE10P-202ENST00000612005 668 ntBASIC12.79□□□□□ -0.36
SSBP1Q04837 SPDYE8P-202ENST00000612377 668 ntBASIC12.79□□□□□ -0.36
SSBP1Q04837 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 AC055717.3-201ENST00000622967 595 ntBASIC12.79□□□□□ -0.36
SSBP1Q04837 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SSBP1Q04837 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
SSBP1Q04837 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.79□□□□□ -0.36
SSBP1Q04837 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SSBP1Q04837 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms