Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.25□□□□□ -0.45
CX3CL1P78423 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CX3CL1P78423 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CX3CL1P78423 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CX3CL1P78423 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CX3CL1P78423 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CX3CL1P78423 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CX3CL1P78423 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CX3CL1P78423 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.25□□□□□ -0.45
CX3CL1P78423 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CX3CL1P78423 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.25□□□□□ -0.45
CX3CL1P78423 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.25□□□□□ -0.45
CX3CL1P78423 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CX3CL1P78423 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CX3CL1P78423 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CX3CL1P78423 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CX3CL1P78423 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CX3CL1P78423 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.24□□□□□ -0.45
CX3CL1P78423 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CX3CL1P78423 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CX3CL1P78423 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.24□□□□□ -0.45
CX3CL1P78423 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.24□□□□□ -0.45
CX3CL1P78423 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.24□□□□□ -0.45
CX3CL1P78423 PIN1P1-201ENST00000412108 996 ntBASIC12.24□□□□□ -0.45
CX3CL1P78423 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.24□□□□□ -0.45
CX3CL1P78423 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.24□□□□□ -0.45
CX3CL1P78423 GHSR-202ENST00000427970 912 ntBASIC12.24□□□□□ -0.45
CX3CL1P78423 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.24□□□□□ -0.45
CX3CL1P78423 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.24□□□□□ -0.45
CX3CL1P78423 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.24□□□□□ -0.45
CX3CL1P78423 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CX3CL1P78423 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.24□□□□□ -0.45
CX3CL1P78423 AC123567.1-201ENST00000548294 1261 ntBASIC12.24□□□□□ -0.45
CX3CL1P78423 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.24□□□□□ -0.45
CX3CL1P78423 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.24□□□□□ -0.45
CX3CL1P78423 AC092364.2-202ENST00000597012 1073 ntBASIC12.24□□□□□ -0.45
CX3CL1P78423 AL049840.4-201ENST00000602422 811 ntBASIC12.24□□□□□ -0.45
CX3CL1P78423 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.24□□□□□ -0.45
CX3CL1P78423 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.24□□□□□ -0.45
CX3CL1P78423 FGD5P1-202ENST00000614866 2498 ntBASIC12.24□□□□□ -0.45
CX3CL1P78423 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.24□□□□□ -0.45
CX3CL1P78423 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
CX3CL1P78423 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CX3CL1P78423 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.23□□□□□ -0.45
CX3CL1P78423 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.23□□□□□ -0.45
CX3CL1P78423 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CX3CL1P78423 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CX3CL1P78423 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
CX3CL1P78423 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 DRD5P1-201ENST00000456605 1438 ntBASIC12.23□□□□□ -0.45
CX3CL1P78423 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CX3CL1P78423 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.23□□□□□ -0.45
CX3CL1P78423 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 VDAC1P7-201ENST00000462417 847 ntBASIC12.23□□□□□ -0.45
CX3CL1P78423 GAPDHP40-201ENST00000505218 1006 ntBASIC12.23□□□□□ -0.45
CX3CL1P78423 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.23□□□□□ -0.45
CX3CL1P78423 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms