Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC133539.2-201ENST00000604757 467 ntBASIC15.83■□□□□ 0.12
IRX4P78413 AL022328.1-201ENST00000610050 478 ntBASIC15.83■□□□□ 0.12
IRX4P78413 CU634019.7-201ENST00000624153 1185 ntBASIC15.83■□□□□ 0.12
IRX4P78413 FP236241.2-201ENST00000624906 1185 ntBASIC15.83■□□□□ 0.12
IRX4P78413 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
IRX4P78413 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.83■□□□□ 0.12
IRX4P78413 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.83■□□□□ 0.12
IRX4P78413 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
IRX4P78413 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.83■□□□□ 0.12
IRX4P78413 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.83■□□□□ 0.12
IRX4P78413 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
IRX4P78413 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.83■□□□□ 0.12
IRX4P78413 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
IRX4P78413 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
IRX4P78413 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.82■□□□□ 0.12
IRX4P78413 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
IRX4P78413 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.82■□□□□ 0.12
IRX4P78413 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.82■□□□□ 0.12
IRX4P78413 AC108725.1-201ENST00000495472 409 ntBASIC15.82■□□□□ 0.12
IRX4P78413 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
IRX4P78413 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.82■□□□□ 0.12
IRX4P78413 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.82■□□□□ 0.12
IRX4P78413 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.82■□□□□ 0.12
IRX4P78413 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
IRX4P78413 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
IRX4P78413 BNIP3P1-202ENST00000550043 1585 ntBASIC15.82■□□□□ 0.12
IRX4P78413 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.82■□□□□ 0.12
IRX4P78413 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
IRX4P78413 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
IRX4P78413 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.82■□□□□ 0.12
IRX4P78413 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
IRX4P78413 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
IRX4P78413 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
IRX4P78413 AC087386.2-201ENST00000623212 4637 ntBASIC15.81■□□□□ 0.12
IRX4P78413 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.81■□□□□ 0.12
IRX4P78413 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
IRX4P78413 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
IRX4P78413 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.81■□□□□ 0.12
IRX4P78413 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.81■□□□□ 0.12
IRX4P78413 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.81■□□□□ 0.12
IRX4P78413 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.81■□□□□ 0.12
IRX4P78413 FAM21FP-201ENST00000426241 1131 ntBASIC15.81■□□□□ 0.12
IRX4P78413 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.81■□□□□ 0.12
IRX4P78413 AL136982.4-201ENST00000437689 1740 ntBASIC15.81■□□□□ 0.12
IRX4P78413 AL162726.2-201ENST00000438986 1017 ntBASIC15.81■□□□□ 0.12
IRX4P78413 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.81■□□□□ 0.12
IRX4P78413 BCRP2-202ENST00000447763 634 ntBASIC15.81■□□□□ 0.12
IRX4P78413 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.81■□□□□ 0.12
IRX4P78413 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.81■□□□□ 0.12
IRX4P78413 BCRP6-201ENST00000510112 632 ntBASIC15.81■□□□□ 0.12
IRX4P78413 BCRP7-201ENST00000511549 544 ntBASIC15.81■□□□□ 0.12
IRX4P78413 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.81■□□□□ 0.12
IRX4P78413 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.81■□□□□ 0.12
IRX4P78413 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
IRX4P78413 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.81■□□□□ 0.12
IRX4P78413 MIR5189-201ENST00000577370 114 ntBASIC15.81■□□□□ 0.12
IRX4P78413 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.81■□□□□ 0.12
IRX4P78413 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.81■□□□□ 0.12
IRX4P78413 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.81■□□□□ 0.12
IRX4P78413 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IRX4P78413 CICP23-201ENST00000605013 2741 ntBASIC15.81■□□□□ 0.12
IRX4P78413 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms