Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.01■□□□□ 0.31
TPM4P67936 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM4P67936 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.01■□□□□ 0.31
TPM4P67936 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM4P67936 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC17.01■□□□□ 0.31
TPM4P67936 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TPM4P67936 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TPM4P67936 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TPM4P67936 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17■□□□□ 0.31
TPM4P67936 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17■□□□□ 0.31
TPM4P67936 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TPM4P67936 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 CYP2AB1P-202ENST00000454440 1456 ntBASIC17■□□□□ 0.31
TPM4P67936 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17■□□□□ 0.31
TPM4P67936 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17■□□□□ 0.31
TPM4P67936 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TPM4P67936 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TPM4P67936 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
TPM4P67936 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TPM4P67936 AC015922.1-201ENST00000421102 1152 ntBASIC17■□□□□ 0.31
TPM4P67936 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 MCCD1P2-201ENST00000423228 335 ntBASIC17■□□□□ 0.31
TPM4P67936 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17■□□□□ 0.31
TPM4P67936 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TPM4P67936 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TPM4P67936 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 AC007967.4-201ENST00000614700 386 ntBASIC17■□□□□ 0.31
TPM4P67936 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17■□□□□ 0.31
TPM4P67936 C20orf181-201ENST00000623918 480 ntBASIC17■□□□□ 0.31
TPM4P67936 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TPM4P67936 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17■□□□□ 0.31
TPM4P67936 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17■□□□□ 0.31
TPM4P67936 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM4P67936 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TPM4P67936 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM4P67936 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM4P67936 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TPM4P67936 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM4P67936 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM4P67936 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM4P67936 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TPM4P67936 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM4P67936 AC074338.1-201ENST00000416825 156 ntBASIC16.99■□□□□ 0.31
TPM4P67936 MKNK2P1-201ENST00000437526 628 ntBASIC16.99■□□□□ 0.31
TPM4P67936 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.99■□□□□ 0.31
TPM4P67936 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM4P67936 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.99■□□□□ 0.31
TPM4P67936 KRT126P-201ENST00000549467 1181 ntBASIC16.99■□□□□ 0.31
TPM4P67936 AC040169.1-201ENST00000565382 521 ntBASIC16.99■□□□□ 0.31
TPM4P67936 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
TPM4P67936 AL133215.2-201ENST00000609242 977 ntBASIC16.99■□□□□ 0.31
TPM4P67936 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM4P67936 AC107918.4-201ENST00000641966 3141 ntBASIC16.99■□□□□ 0.31
TPM4P67936 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TPM4P67936 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM4P67936 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms