Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.6□□□□□ -0.23
VBP1P61758 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.6□□□□□ -0.23
VBP1P61758 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.6□□□□□ -0.23
VBP1P61758 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
VBP1P61758 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
VBP1P61758 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
VBP1P61758 MIR1199-201ENST00000621445 119 ntBASIC13.6□□□□□ -0.23
VBP1P61758 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.6□□□□□ -0.23
VBP1P61758 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.6□□□□□ -0.23
VBP1P61758 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.6□□□□□ -0.23
VBP1P61758 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VBP1P61758 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
VBP1P61758 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.6□□□□□ -0.23
VBP1P61758 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.6□□□□□ -0.23
VBP1P61758 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VBP1P61758 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.6□□□□□ -0.23
VBP1P61758 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.6□□□□□ -0.23
VBP1P61758 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
VBP1P61758 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.59□□□□□ -0.23
VBP1P61758 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.59□□□□□ -0.23
VBP1P61758 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.59□□□□□ -0.23
VBP1P61758 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.59□□□□□ -0.23
VBP1P61758 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.59□□□□□ -0.23
VBP1P61758 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VBP1P61758 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VBP1P61758 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.59□□□□□ -0.23
VBP1P61758 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
VBP1P61758 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
VBP1P61758 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
VBP1P61758 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 AC004945.1-201ENST00000416738 983 ntBASIC13.59□□□□□ -0.23
VBP1P61758 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.59□□□□□ -0.23
VBP1P61758 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
VBP1P61758 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.59□□□□□ -0.23
VBP1P61758 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.59□□□□□ -0.23
VBP1P61758 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.59□□□□□ -0.23
VBP1P61758 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.59□□□□□ -0.23
VBP1P61758 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.59□□□□□ -0.23
VBP1P61758 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.59□□□□□ -0.23
VBP1P61758 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.59□□□□□ -0.23
VBP1P61758 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
VBP1P61758 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.59□□□□□ -0.23
VBP1P61758 AGGF1P1-201ENST00000509500 2073 ntBASIC13.59□□□□□ -0.23
VBP1P61758 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VBP1P61758 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.59□□□□□ -0.23
VBP1P61758 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.58□□□□□ -0.23
VBP1P61758 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
VBP1P61758 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
VBP1P61758 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
VBP1P61758 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
VBP1P61758 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
VBP1P61758 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
VBP1P61758 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VBP1P61758 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.58□□□□□ -0.23
VBP1P61758 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
VBP1P61758 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
VBP1P61758 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VBP1P61758 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.58□□□□□ -0.24
VBP1P61758 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VBP1P61758 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 PCDHB18P-202ENST00000526308 3197 ntBASIC13.58□□□□□ -0.24
VBP1P61758 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.58□□□□□ -0.24
VBP1P61758 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VBP1P61758 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
VBP1P61758 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.58□□□□□ -0.24
VBP1P61758 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.58□□□□□ -0.24
VBP1P61758 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.58□□□□□ -0.24
VBP1P61758 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VBP1P61758 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms