Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN6P56747 PRAL-201ENST00000624952 3286 ntBASIC14.47□□□□□ -0.09
CLDN6P56747 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CLDN6P56747 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CLDN6P56747 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN6P56747 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 AC020910.5-201ENST00000623668 1865 ntBASIC14.46□□□□□ -0.09
CLDN6P56747 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN6P56747 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CLDN6P56747 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN6P56747 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLDN6P56747 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN6P56747 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.46□□□□□ -0.09
CLDN6P56747 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CLDN6P56747 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CLDN6P56747 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN6P56747 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 AC114501.1-201ENST00000445949 172 ntBASIC14.46□□□□□ -0.09
CLDN6P56747 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN6P56747 AC125604.1-201ENST00000496255 707 ntBASIC14.46□□□□□ -0.09
CLDN6P56747 MARK2P5-201ENST00000507649 634 ntBASIC14.46□□□□□ -0.09
CLDN6P56747 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
CLDN6P56747 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN6P56747 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN6P56747 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLDN6P56747 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
CLDN6P56747 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN6P56747 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
CLDN6P56747 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN6P56747 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN6P56747 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN6P56747 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.46□□□□□ -0.1
CLDN6P56747 LINC00554-201ENST00000564841 3011 ntBASIC14.46□□□□□ -0.1
CLDN6P56747 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.46□□□□□ -0.1
CLDN6P56747 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN6P56747 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN6P56747 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.1
CLDN6P56747 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.46□□□□□ -0.1
CLDN6P56747 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CLDN6P56747 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN6P56747 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN6P56747 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN6P56747 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN6P56747 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN6P56747 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CLDN6P56747 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CLDN6P56747 CICP13-201ENST00000422015 2789 ntBASIC14.45□□□□□ -0.1
CLDN6P56747 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 RPL13AP19-201ENST00000434320 584 ntBASIC14.45□□□□□ -0.1
CLDN6P56747 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN6P56747 RN7SL181P-201ENST00000462921 277 ntBASIC14.45□□□□□ -0.1
CLDN6P56747 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN6P56747 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN6P56747 MESTP3-201ENST00000503460 968 ntBASIC14.45□□□□□ -0.1
CLDN6P56747 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
CLDN6P56747 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms