Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH4P55283 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.4■□□□□ 0.06
CDH4P55283 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDH4P55283 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDH4P55283 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH4P55283 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH4P55283 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH4P55283 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.4■□□□□ 0.06
CDH4P55283 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.4■□□□□ 0.06
CDH4P55283 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.4■□□□□ 0.06
CDH4P55283 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH4P55283 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH4P55283 AC073413.1-201ENST00000603927 732 ntBASIC15.4■□□□□ 0.06
CDH4P55283 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH4P55283 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH4P55283 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH4P55283 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH4P55283 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH4P55283 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH4P55283 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH4P55283 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH4P55283 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH4P55283 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH4P55283 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDH4P55283 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH4P55283 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH4P55283 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH4P55283 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH4P55283 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH4P55283 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH4P55283 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH4P55283 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH4P55283 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH4P55283 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH4P55283 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH4P55283 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH4P55283 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH4P55283 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.39■□□□□ 0.05
CDH4P55283 ZACNP1-201ENST00000612259 710 ntBASIC15.39■□□□□ 0.05
CDH4P55283 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH4P55283 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH4P55283 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH4P55283 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH4P55283 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CDH4P55283 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH4P55283 SALL4P5-201ENST00000419001 1760 ntBASIC15.39■□□□□ 0.05
CDH4P55283 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH4P55283 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH4P55283 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 AC011840.2-201ENST00000563063 1520 ntBASIC15.38■□□□□ 0.05
CDH4P55283 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDH4P55283 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH4P55283 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CDH4P55283 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH4P55283 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH4P55283 AC144831.1-201ENST00000573312 2656 ntBASIC15.38■□□□□ 0.05
CDH4P55283 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CDH4P55283 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 AL136309.1-201ENST00000403917 691 ntBASIC15.38■□□□□ 0.05
CDH4P55283 RN7SKP175-201ENST00000408472 289 ntBASIC15.38■□□□□ 0.05
CDH4P55283 AC004945.1-201ENST00000416738 983 ntBASIC15.38■□□□□ 0.05
CDH4P55283 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH4P55283 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.38■□□□□ 0.05
CDH4P55283 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms