Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.34■□□□□ 0.53
NUP98P52948 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
NUP98P52948 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP98P52948 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.34■□□□□ 0.53
NUP98P52948 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUP98P52948 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.34■□□□□ 0.53
NUP98P52948 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUP98P52948 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NUP98P52948 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUP98P52948 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NUP98P52948 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
NUP98P52948 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUP98P52948 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.33■□□□□ 0.53
NUP98P52948 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NUP98P52948 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NUP98P52948 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NUP98P52948 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.33■□□□□ 0.53
NUP98P52948 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.33■□□□□ 0.53
NUP98P52948 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.33■□□□□ 0.53
NUP98P52948 CHCHD2P9-201ENST00000461726 456 ntBASIC18.33■□□□□ 0.53
NUP98P52948 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.33■□□□□ 0.53
NUP98P52948 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.33■□□□□ 0.53
NUP98P52948 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.33■□□□□ 0.53
NUP98P52948 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
NUP98P52948 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NUP98P52948 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUP98P52948 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUP98P52948 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NUP98P52948 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.33■□□□□ 0.52
NUP98P52948 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.33■□□□□ 0.52
NUP98P52948 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NUP98P52948 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.33■□□□□ 0.52
NUP98P52948 CICP6-201ENST00000457191 2729 ntBASIC18.33■□□□□ 0.52
NUP98P52948 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUP98P52948 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NUP98P52948 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
NUP98P52948 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NUP98P52948 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NUP98P52948 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.33■□□□□ 0.52
NUP98P52948 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.33■□□□□ 0.52
NUP98P52948 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.32■□□□□ 0.52
NUP98P52948 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NUP98P52948 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NUP98P52948 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.32■□□□□ 0.52
NUP98P52948 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.32■□□□□ 0.52
NUP98P52948 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
NUP98P52948 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NUP98P52948 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NUP98P52948 AC073869.2-201ENST00000417338 1026 ntBASIC18.32■□□□□ 0.52
NUP98P52948 AL355334.1-201ENST00000417713 215 ntBASIC18.32■□□□□ 0.52
NUP98P52948 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.32■□□□□ 0.52
NUP98P52948 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.32■□□□□ 0.52
NUP98P52948 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.32■□□□□ 0.52
NUP98P52948 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.32■□□□□ 0.52
NUP98P52948 MIR6842-201ENST00000612539 65 ntBASIC18.32■□□□□ 0.52
NUP98P52948 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.32■□□□□ 0.52
NUP98P52948 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUP98P52948 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NUP98P52948 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NUP98P52948 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NUP98P52948 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NUP98P52948 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NUP98P52948 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.31■□□□□ 0.52
NUP98P52948 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.31■□□□□ 0.52
NUP98P52948 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUP98P52948 AC093752.3-201ENST00000567343 901 ntBASIC18.31■□□□□ 0.52
NUP98P52948 DRG2-220ENST00000583355 891 ntTSL 3 BASIC18.31■□□□□ 0.52
NUP98P52948 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.31■□□□□ 0.52
NUP98P52948 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.31■□□□□ 0.52
NUP98P52948 AC107464.3-201ENST00000609172 737 ntBASIC18.31■□□□□ 0.52
NUP98P52948 LINC01783-202ENST00000614408 828 ntBASIC18.31■□□□□ 0.52
NUP98P52948 AP001065.2-201ENST00000617205 644 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms