Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.69□□□□□ -0.06
PDX1P52945 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.68□□□□□ -0.06
PDX1P52945 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PDX1P52945 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 AC138035.3-201ENST00000622706 2791 ntBASIC14.68□□□□□ -0.06
PDX1P52945 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.68□□□□□ -0.06
PDX1P52945 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDX1P52945 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 AL109954.1-202ENST00000564051 2148 ntBASIC14.68□□□□□ -0.06
PDX1P52945 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PDX1P52945 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.68□□□□□ -0.06
PDX1P52945 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.68□□□□□ -0.06
PDX1P52945 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 TPM3P8-201ENST00000330554 643 ntBASIC14.68□□□□□ -0.06
PDX1P52945 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PDX1P52945 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.68□□□□□ -0.06
PDX1P52945 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 AC005077.2-201ENST00000449786 690 ntBASIC14.68□□□□□ -0.06
PDX1P52945 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.68□□□□□ -0.06
PDX1P52945 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.68□□□□□ -0.06
PDX1P52945 AC020914.3-201ENST00000594712 304 ntBASIC14.68□□□□□ -0.06
PDX1P52945 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.68□□□□□ -0.06
PDX1P52945 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDX1P52945 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDX1P52945 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.68□□□□□ -0.06
PDX1P52945 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDX1P52945 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 KRT8P14-201ENST00000414254 1442 ntBASIC14.67□□□□□ -0.06
PDX1P52945 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.67□□□□□ -0.06
PDX1P52945 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDX1P52945 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.67□□□□□ -0.06
PDX1P52945 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.67□□□□□ -0.06
PDX1P52945 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDX1P52945 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.67□□□□□ -0.06
PDX1P52945 NUS1P3-201ENST00000423502 862 ntBASIC14.67□□□□□ -0.06
PDX1P52945 FNTAP2-201ENST00000430308 634 ntBASIC14.67□□□□□ -0.06
PDX1P52945 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.67□□□□□ -0.06
PDX1P52945 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.67□□□□□ -0.06
PDX1P52945 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.67□□□□□ -0.06
PDX1P52945 AP003171.2-201ENST00000528208 925 ntBASIC14.67□□□□□ -0.06
PDX1P52945 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.67□□□□□ -0.06
PDX1P52945 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.67□□□□□ -0.06
PDX1P52945 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
PDX1P52945 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.67□□□□□ -0.06
PDX1P52945 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.67□□□□□ -0.06
PDX1P52945 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.67□□□□□ -0.06
PDX1P52945 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PDX1P52945 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.67□□□□□ -0.06
PDX1P52945 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.67□□□□□ -0.06
PDX1P52945 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 AC103702.1-201ENST00000548801 2630 ntBASIC14.67□□□□□ -0.06
PDX1P52945 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
PDX1P52945 NORAD-201ENST00000565493 5339 ntBASIC14.67□□□□□ -0.06
PDX1P52945 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 AC112693.3-201ENST00000624819 1983 ntBASIC14.67□□□□□ -0.06
PDX1P52945 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDX1P52945 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.67□□□□□ -0.06
PDX1P52945 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.67□□□□□ -0.06
PDX1P52945 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDX1P52945 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDX1P52945 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms