Protein–RNA interactions for Protein: P49848

TAF6, Transcription initiation factor TFIID subunit 6, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF6P49848 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TAF6P49848 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
TAF6P49848 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.07■□□□□ 0.16
TAF6P49848 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.07■□□□□ 0.16
TAF6P49848 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TAF6P49848 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TAF6P49848 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TAF6P49848 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.07■□□□□ 0.16
TAF6P49848 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TAF6P49848 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.06■□□□□ 0.16
TAF6P49848 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.06■□□□□ 0.16
TAF6P49848 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.06■□□□□ 0.16
TAF6P49848 CHMP1AP1-201ENST00000445563 662 ntBASIC16.06■□□□□ 0.16
TAF6P49848 PFN1P12-201ENST00000455938 534 ntBASIC16.06■□□□□ 0.16
TAF6P49848 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.06■□□□□ 0.16
TAF6P49848 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
TAF6P49848 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.06■□□□□ 0.16
TAF6P49848 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.06■□□□□ 0.16
TAF6P49848 AC091271.1-201ENST00000611877 1162 ntBASIC16.06■□□□□ 0.16
TAF6P49848 AC244157.2-201ENST00000616239 1006 ntBASIC16.06■□□□□ 0.16
TAF6P49848 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.06■□□□□ 0.16
TAF6P49848 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 LINC00554-201ENST00000564841 3011 ntBASIC16.06■□□□□ 0.16
TAF6P49848 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.06■□□□□ 0.16
TAF6P49848 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TAF6P49848 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.06■□□□□ 0.16
TAF6P49848 AC104640.1-201ENST00000562617 2109 ntBASIC16.06■□□□□ 0.16
TAF6P49848 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TAF6P49848 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TAF6P49848 AC020910.5-201ENST00000623668 1865 ntBASIC16.05■□□□□ 0.16
TAF6P49848 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TAF6P49848 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TAF6P49848 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TAF6P49848 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TAF6P49848 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TAF6P49848 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.05■□□□□ 0.16
TAF6P49848 HIST2H2BB-201ENST00000449108 381 ntBASIC16.05■□□□□ 0.16
TAF6P49848 RPSAP36-202ENST00000494591 1261 ntBASIC16.05■□□□□ 0.16
TAF6P49848 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.05■□□□□ 0.16
TAF6P49848 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.05■□□□□ 0.16
TAF6P49848 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TAF6P49848 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.05■□□□□ 0.16
TAF6P49848 MIR4538-201ENST00000581377 78 ntBASIC16.05■□□□□ 0.16
TAF6P49848 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.05■□□□□ 0.16
TAF6P49848 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.05■□□□□ 0.16
TAF6P49848 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.05■□□□□ 0.16
TAF6P49848 AC002472.3-201ENST00000640124 621 ntBASIC16.05■□□□□ 0.16
TAF6P49848 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TAF6P49848 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TAF6P49848 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TAF6P49848 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TAF6P49848 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TAF6P49848 SALL4P5-201ENST00000419001 1760 ntBASIC16.05■□□□□ 0.16
TAF6P49848 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TAF6P49848 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TAF6P49848 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.05■□□□□ 0.16
TAF6P49848 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TAF6P49848 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TAF6P49848 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TAF6P49848 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TAF6P49848 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TAF6P49848 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.04■□□□□ 0.16
TAF6P49848 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TAF6P49848 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TAF6P49848 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TAF6P49848 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms