Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TM4SF4P48230 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TM4SF4P48230 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
TM4SF4P48230 PYY2-201ENST00000315776 282 ntBASIC16.77■□□□□ 0.28
TM4SF4P48230 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TM4SF4P48230 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.77■□□□□ 0.28
TM4SF4P48230 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TM4SF4P48230 AC098934.1-203ENST00000442868 1262 ntBASIC16.77■□□□□ 0.28
TM4SF4P48230 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.77■□□□□ 0.28
TM4SF4P48230 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TM4SF4P48230 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.77■□□□□ 0.28
TM4SF4P48230 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TM4SF4P48230 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.77■□□□□ 0.28
TM4SF4P48230 AC010976.2-201ENST00000609697 852 ntBASIC16.77■□□□□ 0.28
TM4SF4P48230 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TM4SF4P48230 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM4SF4P48230 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.77■□□□□ 0.28
TM4SF4P48230 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.77■□□□□ 0.28
TM4SF4P48230 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM4SF4P48230 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TM4SF4P48230 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TM4SF4P48230 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM4SF4P48230 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM4SF4P48230 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM4SF4P48230 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM4SF4P48230 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM4SF4P48230 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.77■□□□□ 0.27
TM4SF4P48230 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.77■□□□□ 0.27
TM4SF4P48230 KRT8P28-201ENST00000433288 1390 ntBASIC16.77■□□□□ 0.27
TM4SF4P48230 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM4SF4P48230 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TM4SF4P48230 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.76■□□□□ 0.27
TM4SF4P48230 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 CICP13-201ENST00000422015 2789 ntBASIC16.76■□□□□ 0.27
TM4SF4P48230 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.76■□□□□ 0.27
TM4SF4P48230 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TM4SF4P48230 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.76■□□□□ 0.27
TM4SF4P48230 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.76■□□□□ 0.27
TM4SF4P48230 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.76■□□□□ 0.27
TM4SF4P48230 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.76■□□□□ 0.27
TM4SF4P48230 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.76■□□□□ 0.27
TM4SF4P48230 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.76■□□□□ 0.27
TM4SF4P48230 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.76■□□□□ 0.27
TM4SF4P48230 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.76■□□□□ 0.27
TM4SF4P48230 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.76■□□□□ 0.27
TM4SF4P48230 PTPN20CP-201ENST00000614090 920 ntBASIC16.76■□□□□ 0.27
TM4SF4P48230 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.76■□□□□ 0.27
TM4SF4P48230 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TM4SF4P48230 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.76■□□□□ 0.27
TM4SF4P48230 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.76■□□□□ 0.27
TM4SF4P48230 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TM4SF4P48230 AL590440.2-201ENST00000641973 1595 ntBASIC16.76■□□□□ 0.27
TM4SF4P48230 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.76■□□□□ 0.27
TM4SF4P48230 AC080080.1-201ENST00000625121 2420 ntBASIC16.76■□□□□ 0.27
TM4SF4P48230 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.76■□□□□ 0.27
TM4SF4P48230 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.76■□□□□ 0.27
TM4SF4P48230 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM4SF4P48230 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.75■□□□□ 0.27
TM4SF4P48230 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TM4SF4P48230 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TM4SF4P48230 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TM4SF4P48230 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.75■□□□□ 0.27
TM4SF4P48230 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TM4SF4P48230 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.75■□□□□ 0.27
TM4SF4P48230 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.75■□□□□ 0.27
TM4SF4P48230 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC16.75■□□□□ 0.27
TM4SF4P48230 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms