Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.12□□□□□ -0.31
CBX5P45973 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.12□□□□□ -0.31
CBX5P45973 RN7SL589P-201ENST00000481268 310 ntBASIC13.12□□□□□ -0.31
CBX5P45973 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CBX5P45973 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.12□□□□□ -0.31
CBX5P45973 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.12□□□□□ -0.31
CBX5P45973 AL049840.3-201ENST00000602669 611 ntBASIC13.12□□□□□ -0.31
CBX5P45973 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.12□□□□□ -0.31
CBX5P45973 AC012313.10-201ENST00000623509 926 ntBASIC13.12□□□□□ -0.31
CBX5P45973 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.12□□□□□ -0.31
CBX5P45973 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
CBX5P45973 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CBX5P45973 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.12□□□□□ -0.31
CBX5P45973 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CBX5P45973 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 AC113367.3-201ENST00000508316 1912 ntBASIC13.11□□□□□ -0.31
CBX5P45973 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 AC012508.2-201ENST00000567613 1472 ntBASIC13.11□□□□□ -0.31
CBX5P45973 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CBX5P45973 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.11□□□□□ -0.31
CBX5P45973 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 AZGP1P1-201ENST00000411909 902 ntBASIC13.11□□□□□ -0.31
CBX5P45973 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.11□□□□□ -0.31
CBX5P45973 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.11□□□□□ -0.31
CBX5P45973 AL135744.1-201ENST00000565098 629 ntBASIC13.11□□□□□ -0.31
CBX5P45973 AC018845.2-201ENST00000568326 409 ntBASIC13.11□□□□□ -0.31
CBX5P45973 AC064836.3-201ENST00000607928 673 ntBASIC13.11□□□□□ -0.31
CBX5P45973 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.11□□□□□ -0.31
CBX5P45973 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CBX5P45973 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CBX5P45973 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.11□□□□□ -0.31
CBX5P45973 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
CBX5P45973 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CBX5P45973 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CBX5P45973 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CBX5P45973 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CBX5P45973 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CBX5P45973 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CBX5P45973 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CBX5P45973 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.1□□□□□ -0.31
CBX5P45973 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.1□□□□□ -0.31
CBX5P45973 AC106818.1-201ENST00000623223 3242 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms