Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
CXCL5P42830 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
CXCL5P42830 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.27□□□□□ -0.77
CXCL5P42830 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 MRPL3P1-201ENST00000400109 1033 ntBASIC10.27□□□□□ -0.77
CXCL5P42830 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.27□□□□□ -0.77
CXCL5P42830 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 SPDYE17-201ENST00000412399 783 ntBASIC10.27□□□□□ -0.77
CXCL5P42830 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.27□□□□□ -0.77
CXCL5P42830 AC079140.1-201ENST00000508039 487 ntBASIC10.27□□□□□ -0.77
CXCL5P42830 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.27□□□□□ -0.77
CXCL5P42830 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
CXCL5P42830 AC243562.1-201ENST00000560672 389 ntBASIC10.27□□□□□ -0.77
CXCL5P42830 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.27□□□□□ -0.77
CXCL5P42830 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 SLC25A6P4-201ENST00000586535 553 ntBASIC10.27□□□□□ -0.77
CXCL5P42830 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
CXCL5P42830 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 AC027601.4-201ENST00000611259 610 ntBASIC10.27□□□□□ -0.77
CXCL5P42830 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.27□□□□□ -0.77
CXCL5P42830 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.27□□□□□ -0.77
CXCL5P42830 AC084121.4-201ENST00000641598 221 ntBASIC10.27□□□□□ -0.77
CXCL5P42830 AF228730.8-201ENST00000642140 221 ntBASIC10.27□□□□□ -0.77
CXCL5P42830 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.27□□□□□ -0.77
CXCL5P42830 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC10.27□□□□□ -0.77
CXCL5P42830 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC10.27□□□□□ -0.77
CXCL5P42830 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
CXCL5P42830 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
CXCL5P42830 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CXCL5P42830 AL035456.1-201ENST00000456064 1369 ntBASIC10.26□□□□□ -0.77
CXCL5P42830 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
CXCL5P42830 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
CXCL5P42830 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms