Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GRIA1P42261 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA1P42261 AL354702.1-201ENST00000442006 1960 ntBASIC15.31■□□□□ 0.04
GRIA1P42261 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GRIA1P42261 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GRIA1P42261 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
GRIA1P42261 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA1P42261 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GRIA1P42261 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.31■□□□□ 0.04
GRIA1P42261 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.31■□□□□ 0.04
GRIA1P42261 AC104596.2-201ENST00000512793 793 ntBASIC15.31■□□□□ 0.04
GRIA1P42261 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA1P42261 DUX4L47-201ENST00000566374 394 ntBASIC15.31■□□□□ 0.04
GRIA1P42261 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA1P42261 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.31■□□□□ 0.04
GRIA1P42261 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA1P42261 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.31■□□□□ 0.04
GRIA1P42261 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIA1P42261 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.31■□□□□ 0.04
GRIA1P42261 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GRIA1P42261 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
GRIA1P42261 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIA1P42261 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GRIA1P42261 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA1P42261 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIA1P42261 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.31■□□□□ 0.04
GRIA1P42261 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GRIA1P42261 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIA1P42261 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIA1P42261 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GRIA1P42261 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.3■□□□□ 0.04
GRIA1P42261 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.3■□□□□ 0.04
GRIA1P42261 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.3■□□□□ 0.04
GRIA1P42261 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GRIA1P42261 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GRIA1P42261 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.3■□□□□ 0.04
GRIA1P42261 AL442647.2-201ENST00000429864 857 ntBASIC15.3■□□□□ 0.04
GRIA1P42261 DFFBP1-201ENST00000433250 979 ntBASIC15.3■□□□□ 0.04
GRIA1P42261 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.3■□□□□ 0.04
GRIA1P42261 AC026434.2-201ENST00000506094 1078 ntBASIC15.3■□□□□ 0.04
GRIA1P42261 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GRIA1P42261 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GRIA1P42261 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.3■□□□□ 0.04
GRIA1P42261 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.3■□□□□ 0.04
GRIA1P42261 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GRIA1P42261 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
GRIA1P42261 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.3■□□□□ 0.04
GRIA1P42261 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GRIA1P42261 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GRIA1P42261 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GRIA1P42261 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms