Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.35□□□□□ -0.27
THBS4P35443 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 AP000845.1-201ENST00000581677 2131 ntBASIC13.34□□□□□ -0.27
THBS4P35443 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
THBS4P35443 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
THBS4P35443 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.34□□□□□ -0.27
THBS4P35443 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
THBS4P35443 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
THBS4P35443 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 AC104457.1-201ENST00000401024 814 ntBASIC13.34□□□□□ -0.27
THBS4P35443 TMEM14DP-201ENST00000422205 345 ntBASIC13.34□□□□□ -0.27
THBS4P35443 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 U91328.1-201ENST00000437528 223 ntBASIC13.34□□□□□ -0.27
THBS4P35443 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.34□□□□□ -0.27
THBS4P35443 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.34□□□□□ -0.27
THBS4P35443 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.34□□□□□ -0.27
THBS4P35443 AC107373.2-201ENST00000607735 490 ntBASIC13.34□□□□□ -0.27
THBS4P35443 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
THBS4P35443 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 AC067750.1-201ENST00000608826 6545 ntBASIC13.34□□□□□ -0.27
THBS4P35443 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.34□□□□□ -0.27
THBS4P35443 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
THBS4P35443 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
THBS4P35443 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
THBS4P35443 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
THBS4P35443 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
THBS4P35443 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
THBS4P35443 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.33□□□□□ -0.27
THBS4P35443 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
THBS4P35443 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
THBS4P35443 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
THBS4P35443 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
THBS4P35443 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
THBS4P35443 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
THBS4P35443 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
THBS4P35443 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.33□□□□□ -0.28
THBS4P35443 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.33□□□□□ -0.28
THBS4P35443 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.33□□□□□ -0.28
THBS4P35443 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.33□□□□□ -0.28
THBS4P35443 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.33□□□□□ -0.28
THBS4P35443 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
THBS4P35443 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 RPSAP52-203ENST00000622976 1023 ntBASIC13.33□□□□□ -0.28
THBS4P35443 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
THBS4P35443 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
THBS4P35443 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
THBS4P35443 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms