Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.45□□□□□ -0.1
GPC1P35052 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
GPC1P35052 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC1P35052 DOC2GP-202ENST00000514950 1163 ntBASIC14.45□□□□□ -0.1
GPC1P35052 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GPC1P35052 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC1P35052 RFPL4AP1-201ENST00000530883 850 ntBASIC14.45□□□□□ -0.1
GPC1P35052 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.45□□□□□ -0.1
GPC1P35052 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 AC005498.2-205ENST00000593218 784 ntBASIC14.45□□□□□ -0.1
GPC1P35052 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC14.45□□□□□ -0.1
GPC1P35052 AP003400.6-201ENST00000624698 740 ntBASIC14.45□□□□□ -0.1
GPC1P35052 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC1P35052 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
GPC1P35052 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC1P35052 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.45□□□□□ -0.1
GPC1P35052 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
GPC1P35052 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GPC1P35052 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GPC1P35052 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GPC1P35052 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GPC1P35052 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.44□□□□□ -0.1
GPC1P35052 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 AC015656.1-201ENST00000624209 3578 ntBASIC14.44□□□□□ -0.1
GPC1P35052 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC1P35052 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 SPDYE19P-201ENST00000338590 713 ntBASIC14.44□□□□□ -0.1
GPC1P35052 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.44□□□□□ -0.1
GPC1P35052 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.44□□□□□ -0.1
GPC1P35052 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.44□□□□□ -0.1
GPC1P35052 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 FAM86LP-201ENST00000478302 853 ntBASIC14.44□□□□□ -0.1
GPC1P35052 RNA5SP421-201ENST00000516864 134 ntBASIC14.44□□□□□ -0.1
GPC1P35052 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.44□□□□□ -0.1
GPC1P35052 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.44□□□□□ -0.1
GPC1P35052 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.44□□□□□ -0.1
GPC1P35052 RARRES2P5-201ENST00000564013 466 ntBASIC14.44□□□□□ -0.1
GPC1P35052 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC1P35052 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.44□□□□□ -0.1
GPC1P35052 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.44□□□□□ -0.1
GPC1P35052 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.44□□□□□ -0.1
GPC1P35052 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC1P35052 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
GPC1P35052 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.44□□□□□ -0.1
GPC1P35052 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.44□□□□□ -0.1
GPC1P35052 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GPC1P35052 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
GPC1P35052 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC1P35052 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GPC1P35052 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.44□□□□□ -0.1
GPC1P35052 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC1P35052 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC1P35052 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
GPC1P35052 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC1P35052 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.44□□□□□ -0.1
GPC1P35052 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GPC1P35052 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.44□□□□□ -0.1
GPC1P35052 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
GPC1P35052 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC1P35052 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.43□□□□□ -0.1
GPC1P35052 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GPC1P35052 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms