Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.4□□□□□ -0.1
LAMA1P25391 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC14.4□□□□□ -0.1
LAMA1P25391 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.4□□□□□ -0.1
LAMA1P25391 AC140113.1-201ENST00000603467 169 ntBASIC14.4□□□□□ -0.1
LAMA1P25391 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.4□□□□□ -0.1
LAMA1P25391 LINC00431-202ENST00000636375 159 ntBASIC14.4□□□□□ -0.1
LAMA1P25391 AP001184.1-201ENST00000637936 376 ntBASIC14.4□□□□□ -0.1
LAMA1P25391 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMA1P25391 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LAMA1P25391 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
LAMA1P25391 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
LAMA1P25391 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMA1P25391 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMA1P25391 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMA1P25391 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.39□□□□□ -0.11
LAMA1P25391 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMA1P25391 MIR6720-201ENST00000611664 98 ntBASIC14.39□□□□□ -0.11
LAMA1P25391 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
LAMA1P25391 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.39□□□□□ -0.11
LAMA1P25391 AC023024.2-201ENST00000623561 1993 ntBASIC14.39□□□□□ -0.11
LAMA1P25391 TMBIM7P-202ENST00000641474 1516 ntBASIC14.39□□□□□ -0.11
LAMA1P25391 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LAMA1P25391 AC024293.1-201ENST00000467930 498 ntBASIC14.39□□□□□ -0.11
LAMA1P25391 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.39□□□□□ -0.11
LAMA1P25391 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.39□□□□□ -0.11
LAMA1P25391 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.39□□□□□ -0.11
LAMA1P25391 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.39□□□□□ -0.11
LAMA1P25391 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.39□□□□□ -0.11
LAMA1P25391 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
LAMA1P25391 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LAMA1P25391 AC139712.1-201ENST00000378256 1875 ntBASIC14.39□□□□□ -0.11
LAMA1P25391 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 ORAOV1P1-201ENST00000503108 395 ntBASIC14.38□□□□□ -0.11
LAMA1P25391 ALG3P1-201ENST00000508806 1114 ntBASIC14.38□□□□□ -0.11
LAMA1P25391 AC007952.4-201ENST00000573866 637 ntBASIC14.38□□□□□ -0.11
LAMA1P25391 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.38□□□□□ -0.11
LAMA1P25391 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.38□□□□□ -0.11
LAMA1P25391 PLS3-210ENST00000626746 216 ntTSL 4 BASIC14.38□□□□□ -0.11
LAMA1P25391 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LAMA1P25391 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.38□□□□□ -0.11
LAMA1P25391 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.38□□□□□ -0.11
LAMA1P25391 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.38□□□□□ -0.11
LAMA1P25391 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LAMA1P25391 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.38□□□□□ -0.11
LAMA1P25391 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.38□□□□□ -0.11
LAMA1P25391 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 MIR566-201ENST00000385187 94 ntBASIC14.38□□□□□ -0.11
LAMA1P25391 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.38□□□□□ -0.11
LAMA1P25391 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.38□□□□□ -0.11
LAMA1P25391 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LAMA1P25391 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.38□□□□□ -0.11
LAMA1P25391 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LAMA1P25391 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.38□□□□□ -0.11
LAMA1P25391 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.38□□□□□ -0.11
LAMA1P25391 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LAMA1P25391 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.38□□□□□ -0.11
LAMA1P25391 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.38□□□□□ -0.11
LAMA1P25391 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.38□□□□□ -0.11
LAMA1P25391 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LAMA1P25391 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.38□□□□□ -0.11
LAMA1P25391 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms