Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC092552.1-201ENST00000547243 906 ntBASIC12.98□□□□□ -0.33
CCL1P22362 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.98□□□□□ -0.33
CCL1P22362 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.98□□□□□ -0.33
CCL1P22362 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.98□□□□□ -0.33
CCL1P22362 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.98□□□□□ -0.33
CCL1P22362 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CCL1P22362 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL1P22362 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCL1P22362 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CCL1P22362 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 AL928921.2-201ENST00000641325 2442 ntBASIC12.98□□□□□ -0.33
CCL1P22362 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CCL1P22362 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL1P22362 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL1P22362 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CCL1P22362 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCL1P22362 AC003102.2-201ENST00000589195 1469 ntBASIC12.97□□□□□ -0.33
CCL1P22362 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCL1P22362 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL1P22362 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CCL1P22362 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.97□□□□□ -0.33
CCL1P22362 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
CCL1P22362 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CCL1P22362 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL1P22362 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCL1P22362 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL1P22362 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CCL1P22362 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CCL1P22362 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 ACTBP8-201ENST00000403258 1108 ntBASIC12.97□□□□□ -0.33
CCL1P22362 AC007969.1-201ENST00000433675 447 ntBASIC12.97□□□□□ -0.33
CCL1P22362 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL1P22362 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 AC093214.1-201ENST00000511688 1107 ntBASIC12.97□□□□□ -0.33
CCL1P22362 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL1P22362 AL359711.2-201ENST00000563105 872 ntBASIC12.97□□□□□ -0.33
CCL1P22362 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.97□□□□□ -0.33
CCL1P22362 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCL1P22362 AC106028.4-201ENST00000614509 607 ntBASIC12.97□□□□□ -0.33
CCL1P22362 AP005019.2-201ENST00000615104 511 ntBASIC12.97□□□□□ -0.33
CCL1P22362 AC008761.3-201ENST00000624803 892 ntBASIC12.97□□□□□ -0.33
CCL1P22362 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CCL1P22362 MYO15B-237ENST00000642007 4893 ntBASIC12.97□□□□□ -0.33
CCL1P22362 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCL1P22362 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.97□□□□□ -0.33
CCL1P22362 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CCL1P22362 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL1P22362 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL1P22362 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CCL1P22362 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL1P22362 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL1P22362 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL1P22362 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms