Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH3P22223 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH3P22223 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH3P22223 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH3P22223 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH3P22223 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDH3P22223 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH3P22223 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDH3P22223 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH3P22223 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH3P22223 AC112492.5-201ENST00000421897 457 ntBASIC14.9□□□□□ -0.02
CDH3P22223 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH3P22223 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH3P22223 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH3P22223 AC068587.3-201ENST00000526613 355 ntBASIC14.9□□□□□ -0.02
CDH3P22223 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.9□□□□□ -0.02
CDH3P22223 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 AP001063.1-201ENST00000568332 529 ntBASIC14.9□□□□□ -0.02
CDH3P22223 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH3P22223 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH3P22223 AC017083.2-201ENST00000608069 979 ntBASIC14.9□□□□□ -0.02
CDH3P22223 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.9□□□□□ -0.02
CDH3P22223 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 MYO15B-237ENST00000642007 4893 ntBASIC14.9□□□□□ -0.02
CDH3P22223 LINC01101-201ENST00000622953 1884 ntBASIC14.9□□□□□ -0.02
CDH3P22223 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDH3P22223 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH3P22223 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH3P22223 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDH3P22223 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH3P22223 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDH3P22223 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.89□□□□□ -0.03
CDH3P22223 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.89□□□□□ -0.03
CDH3P22223 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDH3P22223 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH3P22223 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.89□□□□□ -0.03
CDH3P22223 AL355864.2-201ENST00000447420 863 ntBASIC14.89□□□□□ -0.03
CDH3P22223 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.89□□□□□ -0.03
CDH3P22223 ACA64.2-201ENST00000459014 129 ntBASIC14.89□□□□□ -0.03
CDH3P22223 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.89□□□□□ -0.03
CDH3P22223 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms