Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.97■□□□□ 0.15
PTPN1P18031 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN1P18031 AP003171.2-201ENST00000528208 925 ntBASIC15.97■□□□□ 0.15
PTPN1P18031 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 C2orf69P2-201ENST00000562032 1123 ntBASIC15.97■□□□□ 0.15
PTPN1P18031 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN1P18031 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN1P18031 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 TCAF2P1-201ENST00000291129 2421 ntBASIC15.97■□□□□ 0.15
PTPN1P18031 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PTPN1P18031 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN1P18031 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN1P18031 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN1P18031 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN1P18031 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PTPN1P18031 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PTPN1P18031 NORAD-201ENST00000565493 5339 ntBASIC15.96■□□□□ 0.15
PTPN1P18031 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN1P18031 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
PTPN1P18031 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN1P18031 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN1P18031 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN1P18031 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 CNN2P10-201ENST00000443067 918 ntBASIC15.96■□□□□ 0.15
PTPN1P18031 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN1P18031 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.96■□□□□ 0.15
PTPN1P18031 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN1P18031 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 RN7SL713P-201ENST00000582127 302 ntBASIC15.96■□□□□ 0.15
PTPN1P18031 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN1P18031 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 AC009542.2-202ENST00000619004 1067 ntBASIC15.96■□□□□ 0.15
PTPN1P18031 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 TNRC18P2-201ENST00000417666 2714 ntBASIC15.96■□□□□ 0.15
PTPN1P18031 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN1P18031 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN1P18031 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 AC067930.6-201ENST00000623257 4947 ntBASIC15.96■□□□□ 0.15
PTPN1P18031 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN1P18031 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PTPN1P18031 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN1P18031 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN1P18031 LINC00528-201ENST00000600723 2160 ntBASIC15.96■□□□□ 0.14
PTPN1P18031 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
PTPN1P18031 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN1P18031 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.96■□□□□ 0.14
PTPN1P18031 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN1P18031 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN1P18031 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN1P18031 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
PTPN1P18031 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN1P18031 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.95■□□□□ 0.14
PTPN1P18031 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.95■□□□□ 0.14
PTPN1P18031 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.95■□□□□ 0.14
PTPN1P18031 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN1P18031 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN1P18031 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN1P18031 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN1P18031 HOMER2P2-201ENST00000451621 847 ntBASIC15.95■□□□□ 0.14
PTPN1P18031 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PTPN1P18031 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.95■□□□□ 0.14
PTPN1P18031 AC073413.1-201ENST00000603927 732 ntBASIC15.95■□□□□ 0.14
PTPN1P18031 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms