Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.1□□□□□ -0.15
PRKCAP17252 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PRKCAP17252 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PRKCAP17252 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PRKCAP17252 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.1□□□□□ -0.15
PRKCAP17252 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.1□□□□□ -0.15
PRKCAP17252 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.1□□□□□ -0.15
PRKCAP17252 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 RN7SL399P-201ENST00000471648 279 ntBASIC14.09□□□□□ -0.15
PRKCAP17252 FAM86LP-201ENST00000478302 853 ntBASIC14.09□□□□□ -0.15
PRKCAP17252 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.09□□□□□ -0.15
PRKCAP17252 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.09□□□□□ -0.15
PRKCAP17252 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.09□□□□□ -0.15
PRKCAP17252 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
PRKCAP17252 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 AC126365.1-201ENST00000578585 1514 ntBASIC14.09□□□□□ -0.15
PRKCAP17252 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PRKCAP17252 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PRKCAP17252 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.09□□□□□ -0.15
PRKCAP17252 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 AL391825.1-201ENST00000457671 1364 ntBASIC14.09□□□□□ -0.15
PRKCAP17252 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PRKCAP17252 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.08□□□□□ -0.15
PRKCAP17252 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PRKCAP17252 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
PRKCAP17252 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PRKCAP17252 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PRKCAP17252 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PRKCAP17252 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.08□□□□□ -0.15
PRKCAP17252 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 BEND3P1-201ENST00000421591 1944 ntBASIC14.08□□□□□ -0.16
PRKCAP17252 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 AC007541.1-201ENST00000570282 1469 ntBASIC14.08□□□□□ -0.16
PRKCAP17252 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms