Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCL3L1P16619 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL3L1P16619 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CCL3L1P16619 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 AC018665.1-201ENST00000622927 1362 ntBASIC12.49□□□□□ -0.41
CCL3L1P16619 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CCL3L1P16619 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.49□□□□□ -0.41
CCL3L1P16619 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.49□□□□□ -0.41
CCL3L1P16619 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.49□□□□□ -0.41
CCL3L1P16619 CR383656.12-201ENST00000549567 513 ntBASIC12.49□□□□□ -0.41
CCL3L1P16619 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.49□□□□□ -0.41
CCL3L1P16619 AC233724.13-201ENST00000598383 410 ntBASIC12.49□□□□□ -0.41
CCL3L1P16619 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL3L1P16619 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL3L1P16619 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL3L1P16619 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CCL3L1P16619 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL3L1P16619 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CCL3L1P16619 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
CCL3L1P16619 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CCL3L1P16619 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL3L1P16619 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL3L1P16619 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL3L1P16619 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL3L1P16619 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms