Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 CICP20-201ENST00000443330 2801 ntBASIC13.32□□□□□ -0.28
UBCP0CG48 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.32□□□□□ -0.28
UBCP0CG48 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UBCP0CG48 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.32□□□□□ -0.28
UBCP0CG48 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.32□□□□□ -0.28
UBCP0CG48 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UBCP0CG48 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.32□□□□□ -0.28
UBCP0CG48 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.32□□□□□ -0.28
UBCP0CG48 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.32□□□□□ -0.28
UBCP0CG48 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.32□□□□□ -0.28
UBCP0CG48 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
UBCP0CG48 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.32□□□□□ -0.28
UBCP0CG48 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.32□□□□□ -0.28
UBCP0CG48 TIMM17BP1-201ENST00000545713 516 ntBASIC13.32□□□□□ -0.28
UBCP0CG48 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.32□□□□□ -0.28
UBCP0CG48 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
UBCP0CG48 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.32□□□□□ -0.28
UBCP0CG48 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.32□□□□□ -0.28
UBCP0CG48 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.32□□□□□ -0.28
UBCP0CG48 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
UBCP0CG48 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.32□□□□□ -0.28
UBCP0CG48 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UBCP0CG48 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UBCP0CG48 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.31□□□□□ -0.28
UBCP0CG48 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.31□□□□□ -0.28
UBCP0CG48 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UBCP0CG48 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UBCP0CG48 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
UBCP0CG48 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.31□□□□□ -0.28
UBCP0CG48 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.31□□□□□ -0.28
UBCP0CG48 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.31□□□□□ -0.28
UBCP0CG48 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.31□□□□□ -0.28
UBCP0CG48 AC125807.1-201ENST00000483097 614 ntBASIC13.31□□□□□ -0.28
UBCP0CG48 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 ZNF890P-202ENST00000530367 1156 ntBASIC13.31□□□□□ -0.28
UBCP0CG48 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.31□□□□□ -0.28
UBCP0CG48 SNHG9-202ENST00000564014 471 ntBASIC13.31□□□□□ -0.28
UBCP0CG48 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.31□□□□□ -0.28
UBCP0CG48 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 AL360270.3-201ENST00000609118 1348 ntBASIC13.31□□□□□ -0.28
UBCP0CG48 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
UBCP0CG48 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
UBCP0CG48 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UBCP0CG48 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBCP0CG48 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms