Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CTSDP07339 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.6□□□□□ -0.39
CTSDP07339 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CTSDP07339 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
CTSDP07339 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.59□□□□□ -0.39
CTSDP07339 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.59□□□□□ -0.39
CTSDP07339 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.59□□□□□ -0.39
CTSDP07339 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CTSDP07339 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.59□□□□□ -0.39
CTSDP07339 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CTSDP07339 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CTSDP07339 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CTSDP07339 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CTSDP07339 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.59□□□□□ -0.39
CTSDP07339 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CTSDP07339 AC015922.1-201ENST00000421102 1152 ntBASIC12.59□□□□□ -0.39
CTSDP07339 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.59□□□□□ -0.39
CTSDP07339 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.59□□□□□ -0.39
CTSDP07339 TMEM198B-204ENST00000484016 896 ntBASIC12.59□□□□□ -0.39
CTSDP07339 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.59□□□□□ -0.39
CTSDP07339 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.59□□□□□ -0.39
CTSDP07339 AC040169.1-201ENST00000565382 521 ntBASIC12.59□□□□□ -0.39
CTSDP07339 AL133215.2-201ENST00000609242 977 ntBASIC12.59□□□□□ -0.39
CTSDP07339 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.59□□□□□ -0.39
CTSDP07339 TCAF1P1-201ENST00000414990 2232 ntBASIC12.59□□□□□ -0.39
CTSDP07339 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CTSDP07339 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CTSDP07339 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.59□□□□□ -0.39
CTSDP07339 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 INE2-201ENST00000630399 1874 ntBASIC12.59□□□□□ -0.39
CTSDP07339 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.59□□□□□ -0.39
CTSDP07339 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTSDP07339 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
CTSDP07339 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CTSDP07339 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CTSDP07339 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.58□□□□□ -0.39
CTSDP07339 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.58□□□□□ -0.4
CTSDP07339 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CTSDP07339 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 AL121723.1-201ENST00000445194 1519 ntBASIC12.58□□□□□ -0.4
CTSDP07339 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.58□□□□□ -0.4
CTSDP07339 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CTSDP07339 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTSDP07339 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms