Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 COX5BP1-201ENST00000507622 393 ntBASIC18.07■□□□□ 0.48
CHGBP05060 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.07■□□□□ 0.48
CHGBP05060 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.07■□□□□ 0.48
CHGBP05060 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CHGBP05060 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.06■□□□□ 0.48
CHGBP05060 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHGBP05060 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 CD8B2-202ENST00000417670 633 ntBASIC18.06■□□□□ 0.48
CHGBP05060 AC244107.1-201ENST00000442033 332 ntBASIC18.06■□□□□ 0.48
CHGBP05060 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.06■□□□□ 0.48
CHGBP05060 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.06■□□□□ 0.48
CHGBP05060 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.06■□□□□ 0.48
CHGBP05060 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.06■□□□□ 0.48
CHGBP05060 MIR4783-201ENST00000580343 82 ntBASIC18.06■□□□□ 0.48
CHGBP05060 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.06■□□□□ 0.48
CHGBP05060 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.06■□□□□ 0.48
CHGBP05060 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CHGBP05060 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.06■□□□□ 0.48
CHGBP05060 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHGBP05060 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHGBP05060 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHGBP05060 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.05■□□□□ 0.48
CHGBP05060 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.05■□□□□ 0.48
CHGBP05060 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 RN7SKP175-201ENST00000408472 289 ntBASIC18.05■□□□□ 0.48
CHGBP05060 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.05■□□□□ 0.48
CHGBP05060 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 FTLP10-202ENST00000505798 471 ntBASIC18.05■□□□□ 0.48
CHGBP05060 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CHGBP05060 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.05■□□□□ 0.48
CHGBP05060 RN7SL713P-201ENST00000582127 302 ntBASIC18.05■□□□□ 0.48
CHGBP05060 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHGBP05060 AL023775.1-201ENST00000454907 1746 ntBASIC18.05■□□□□ 0.48
CHGBP05060 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHGBP05060 LINC00552-201ENST00000625151 2579 ntBASIC18.05■□□□□ 0.48
CHGBP05060 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.05■□□□□ 0.48
CHGBP05060 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHGBP05060 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.05■□□□□ 0.48
CHGBP05060 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.05■□□□□ 0.48
CHGBP05060 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHGBP05060 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.05■□□□□ 0.48
CHGBP05060 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.05■□□□□ 0.48
CHGBP05060 AC007292.2-201ENST00000593524 1812 ntBASIC18.05■□□□□ 0.48
CHGBP05060 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHGBP05060 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHGBP05060 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.04■□□□□ 0.48
CHGBP05060 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.04■□□□□ 0.48
CHGBP05060 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.04■□□□□ 0.48
CHGBP05060 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHGBP05060 AC004945.1-201ENST00000416738 983 ntBASIC18.04■□□□□ 0.48
CHGBP05060 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.04■□□□□ 0.48
CHGBP05060 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHGBP05060 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHGBP05060 CHMP1AP1-201ENST00000445563 662 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms