Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TUBB4AP04350 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB4AP04350 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TUBB4AP04350 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBB4AP04350 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TUBB4AP04350 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TUBB4AP04350 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB4AP04350 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB4AP04350 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBB4AP04350 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TUBB4AP04350 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TUBB4AP04350 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TUBB4AP04350 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 CES1P1-201ENST00000421606 1704 ntBASIC16.22■□□□□ 0.19
TUBB4AP04350 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TUBB4AP04350 MIR346-201ENST00000362234 95 ntBASIC16.22■□□□□ 0.19
TUBB4AP04350 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBB4AP04350 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TUBB4AP04350 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBB4AP04350 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
TUBB4AP04350 SLED1-202ENST00000512051 380 ntBASIC16.22■□□□□ 0.19
TUBB4AP04350 AC112191.1-201ENST00000523689 701 ntBASIC16.22■□□□□ 0.19
TUBB4AP04350 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBB4AP04350 AP001005.1-201ENST00000571755 1248 ntBASIC16.22■□□□□ 0.19
TUBB4AP04350 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBB4AP04350 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBB4AP04350 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBB4AP04350 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBB4AP04350 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
TUBB4AP04350 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TUBB4AP04350 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBB4AP04350 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBB4AP04350 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBB4AP04350 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TUBB4AP04350 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TUBB4AP04350 HLA-A-201ENST00000376802 1334 ntBASIC16.21■□□□□ 0.19
TUBB4AP04350 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TUBB4AP04350 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TUBB4AP04350 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB4AP04350 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
TUBB4AP04350 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBB4AP04350 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBB4AP04350 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB4AP04350 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBB4AP04350 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBB4AP04350 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB4AP04350 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB4AP04350 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB4AP04350 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB4AP04350 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.21■□□□□ 0.19
TUBB4AP04350 HIST3H2BA-201ENST00000436555 524 ntBASIC16.21■□□□□ 0.19
TUBB4AP04350 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.21■□□□□ 0.19
TUBB4AP04350 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBB4AP04350 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBB4AP04350 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBB4AP04350 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB4AP04350 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB4AP04350 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.21■□□□□ 0.19
TUBB4AP04350 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBB4AP04350 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBB4AP04350 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.21■□□□□ 0.19
TUBB4AP04350 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms