Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCRP04035 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGCRP04035 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
HMGCRP04035 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.88■□□□□ 0.29
HMGCRP04035 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HMGCRP04035 AC006058.4-201ENST00000624016 1670 ntBASIC16.88■□□□□ 0.29
HMGCRP04035 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCRP04035 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.88■□□□□ 0.29
HMGCRP04035 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 AL157414.3-201ENST00000624276 1954 ntBASIC16.88■□□□□ 0.29
HMGCRP04035 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCRP04035 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HMGCRP04035 AC026320.2-201ENST00000434379 478 ntBASIC16.88■□□□□ 0.29
HMGCRP04035 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.88■□□□□ 0.29
HMGCRP04035 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.88■□□□□ 0.29
HMGCRP04035 IGHV3-37-201ENST00000518544 340 ntBASIC16.88■□□□□ 0.29
HMGCRP04035 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.88■□□□□ 0.29
HMGCRP04035 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HMGCRP04035 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
HMGCRP04035 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCRP04035 MIR3677-201ENST00000578964 60 ntBASIC16.88■□□□□ 0.29
HMGCRP04035 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCRP04035 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.88■□□□□ 0.29
HMGCRP04035 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.88■□□□□ 0.29
HMGCRP04035 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.88■□□□□ 0.29
HMGCRP04035 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.88■□□□□ 0.29
HMGCRP04035 AC020910.5-201ENST00000623668 1865 ntBASIC16.88■□□□□ 0.29
HMGCRP04035 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMGCRP04035 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HMGCRP04035 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
HMGCRP04035 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCRP04035 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCRP04035 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCRP04035 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCRP04035 AC130709.1-201ENST00000484779 1212 ntBASIC16.87■□□□□ 0.29
HMGCRP04035 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.87■□□□□ 0.29
HMGCRP04035 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCRP04035 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HMGCRP04035 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.87■□□□□ 0.29
HMGCRP04035 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.87■□□□□ 0.29
HMGCRP04035 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCRP04035 AC005632.3-201ENST00000605544 308 ntBASIC16.87■□□□□ 0.29
HMGCRP04035 AL157813.1-201ENST00000612996 587 ntBASIC16.87■□□□□ 0.29
HMGCRP04035 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCRP04035 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
HMGCRP04035 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HMGCRP04035 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCRP04035 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGCRP04035 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGCRP04035 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HMGCRP04035 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HMGCRP04035 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGCRP04035 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCRP04035 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCRP04035 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGCRP04035 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGCRP04035 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGCRP04035 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGCRP04035 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HMGCRP04035 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
HMGCRP04035 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGCRP04035 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms