Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC000095.1-201ENST00000603208 874 ntBASIC14.31□□□□□ -0.12
SNX4O95219 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNX4O95219 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SNX4O95219 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.31□□□□□ -0.12
SNX4O95219 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 CU639417.3-201ENST00000624240 1404 ntBASIC14.31□□□□□ -0.12
SNX4O95219 AC006504.5-208ENST00000588784 2401 ntBASIC14.31□□□□□ -0.12
SNX4O95219 AC112693.3-201ENST00000624819 1983 ntBASIC14.31□□□□□ -0.12
SNX4O95219 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX4O95219 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SNX4O95219 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SNX4O95219 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
SNX4O95219 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 AC067750.1-201ENST00000608826 6545 ntBASIC14.3□□□□□ -0.12
SNX4O95219 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 AC148477.4-201ENST00000613430 1793 ntBASIC14.3□□□□□ -0.12
SNX4O95219 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SNX4O95219 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
SNX4O95219 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.3□□□□□ -0.12
SNX4O95219 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.3□□□□□ -0.12
SNX4O95219 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.3□□□□□ -0.12
SNX4O95219 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SNX4O95219 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SNX4O95219 AC012645.4-201ENST00000610691 1061 ntBASIC14.3□□□□□ -0.12
SNX4O95219 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SNX4O95219 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SNX4O95219 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNX4O95219 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX4O95219 CLK3P2-201ENST00000427566 1453 ntBASIC14.3□□□□□ -0.12
SNX4O95219 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SNX4O95219 AL121723.1-201ENST00000445194 1519 ntBASIC14.3□□□□□ -0.12
SNX4O95219 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX4O95219 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.29□□□□□ -0.12
SNX4O95219 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX4O95219 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SNX4O95219 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX4O95219 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SNX4O95219 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX4O95219 AC090616.6-203ENST00000579186 1945 ntBASIC14.29□□□□□ -0.12
SNX4O95219 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX4O95219 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX4O95219 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SNX4O95219 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.29□□□□□ -0.12
SNX4O95219 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.29□□□□□ -0.12
SNX4O95219 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SNX4O95219 DGCR5-201ENST00000399539 862 ntBASIC14.29□□□□□ -0.12
SNX4O95219 AL442647.2-201ENST00000429864 857 ntBASIC14.29□□□□□ -0.12
SNX4O95219 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.29□□□□□ -0.12
SNX4O95219 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX4O95219 AC092552.1-201ENST00000547243 906 ntBASIC14.29□□□□□ -0.12
SNX4O95219 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms