Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CTNSO60931 POM121L8P-201ENST00000417732 1281 ntBASIC14.16□□□□□ -0.14
CTNSO60931 ARSEP1-201ENST00000420443 635 ntBASIC14.16□□□□□ -0.14
CTNSO60931 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.16□□□□□ -0.14
CTNSO60931 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.16□□□□□ -0.14
CTNSO60931 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 RPL7P3-201ENST00000441388 714 ntBASIC14.16□□□□□ -0.14
CTNSO60931 POM121L9P-203ENST00000441984 1285 ntBASIC14.16□□□□□ -0.14
CTNSO60931 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.16□□□□□ -0.14
CTNSO60931 ACA64.2-201ENST00000459014 129 ntBASIC14.16□□□□□ -0.14
CTNSO60931 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.16□□□□□ -0.14
CTNSO60931 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.16□□□□□ -0.14
CTNSO60931 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CTNSO60931 AC023090.2-201ENST00000625182 2110 ntBASIC14.16□□□□□ -0.14
CTNSO60931 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CTNSO60931 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.16□□□□□ -0.14
CTNSO60931 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CTNSO60931 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 AJ011931.1-201ENST00000618749 2492 ntBASIC14.16□□□□□ -0.14
CTNSO60931 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.16□□□□□ -0.14
CTNSO60931 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTNSO60931 PDIA3P1-201ENST00000471856 1510 ntBASIC14.15□□□□□ -0.14
CTNSO60931 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CTNSO60931 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CTNSO60931 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CTNSO60931 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTNSO60931 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.15□□□□□ -0.14
CTNSO60931 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.15□□□□□ -0.14
CTNSO60931 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.15□□□□□ -0.14
CTNSO60931 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 KLF2P4-201ENST00000451959 1225 ntBASIC14.15□□□□□ -0.14
CTNSO60931 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.15□□□□□ -0.14
CTNSO60931 MESTP3-201ENST00000503460 968 ntBASIC14.15□□□□□ -0.14
CTNSO60931 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.15□□□□□ -0.14
CTNSO60931 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.15□□□□□ -0.14
CTNSO60931 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CTNSO60931 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CTNSO60931 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 KRT90P-201ENST00000549264 1064 ntBASIC14.15□□□□□ -0.14
CTNSO60931 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.15□□□□□ -0.14
CTNSO60931 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTNSO60931 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTNSO60931 AC004466.1-201ENST00000599515 1080 ntBASIC14.15□□□□□ -0.14
CTNSO60931 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.15□□□□□ -0.14
CTNSO60931 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.15□□□□□ -0.14
CTNSO60931 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTNSO60931 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTNSO60931 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.15□□□□□ -0.14
CTNSO60931 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTNSO60931 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
CTNSO60931 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.15□□□□□ -0.15
CTNSO60931 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.15□□□□□ -0.15
CTNSO60931 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CTNSO60931 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CTNSO60931 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CTNSO60931 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
CTNSO60931 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CTNSO60931 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms