Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.88■□□□□ 0.13
OPHN1O60890 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
OPHN1O60890 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.87■□□□□ 0.13
OPHN1O60890 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
OPHN1O60890 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.87■□□□□ 0.13
OPHN1O60890 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
OPHN1O60890 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
OPHN1O60890 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
OPHN1O60890 LINC01101-201ENST00000622953 1884 ntBASIC15.87■□□□□ 0.13
OPHN1O60890 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.87■□□□□ 0.13
OPHN1O60890 AC126335.2-201ENST00000623362 4637 ntBASIC15.87■□□□□ 0.13
OPHN1O60890 CLK3P2-201ENST00000427566 1453 ntBASIC15.87■□□□□ 0.13
OPHN1O60890 AL359258.3-201ENST00000622910 2331 ntBASIC15.87■□□□□ 0.13
OPHN1O60890 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
OPHN1O60890 CROCCP4-201ENST00000457096 498 ntBASIC15.87■□□□□ 0.13
OPHN1O60890 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.87■□□□□ 0.13
OPHN1O60890 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.87■□□□□ 0.13
OPHN1O60890 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.87■□□□□ 0.13
OPHN1O60890 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.87■□□□□ 0.13
OPHN1O60890 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.87■□□□□ 0.13
OPHN1O60890 AL645728.2-202ENST00000641679 227 ntBASIC15.87■□□□□ 0.13
OPHN1O60890 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
OPHN1O60890 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
OPHN1O60890 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.87■□□□□ 0.13
OPHN1O60890 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
OPHN1O60890 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
OPHN1O60890 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.87■□□□□ 0.13
OPHN1O60890 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.87■□□□□ 0.13
OPHN1O60890 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
OPHN1O60890 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.87■□□□□ 0.13
OPHN1O60890 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
OPHN1O60890 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPHN1O60890 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.86■□□□□ 0.13
OPHN1O60890 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
OPHN1O60890 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
OPHN1O60890 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.86■□□□□ 0.13
OPHN1O60890 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
OPHN1O60890 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
OPHN1O60890 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.86■□□□□ 0.13
OPHN1O60890 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.86■□□□□ 0.13
OPHN1O60890 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.86■□□□□ 0.13
OPHN1O60890 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.86■□□□□ 0.13
OPHN1O60890 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
OPHN1O60890 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.86■□□□□ 0.13
OPHN1O60890 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
OPHN1O60890 AC092337.1-201ENST00000568699 1129 ntBASIC15.86■□□□□ 0.13
OPHN1O60890 MIR4538-201ENST00000581377 78 ntBASIC15.86■□□□□ 0.13
OPHN1O60890 BTNL10-201ENST00000595971 695 ntBASIC15.86■□□□□ 0.13
OPHN1O60890 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
OPHN1O60890 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.86■□□□□ 0.13
OPHN1O60890 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.86■□□□□ 0.13
OPHN1O60890 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
OPHN1O60890 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPHN1O60890 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
OPHN1O60890 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
OPHN1O60890 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
OPHN1O60890 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
OPHN1O60890 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.85■□□□□ 0.13
OPHN1O60890 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
OPHN1O60890 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
OPHN1O60890 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.85■□□□□ 0.13
OPHN1O60890 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.85■□□□□ 0.13
OPHN1O60890 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
OPHN1O60890 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.85■□□□□ 0.13
OPHN1O60890 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
OPHN1O60890 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
OPHN1O60890 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms