Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RN7SL589P-201ENST00000481268 310 ntBASIC12.39□□□□□ -0.43
SSSCA1O60232 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.39□□□□□ -0.43
SSSCA1O60232 AC022447.6-201ENST00000515522 438 ntBASIC12.39□□□□□ -0.43
SSSCA1O60232 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.39□□□□□ -0.43
SSSCA1O60232 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.39□□□□□ -0.43
SSSCA1O60232 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SSSCA1O60232 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
SSSCA1O60232 AP000842.3-202ENST00000569238 1080 ntBASIC12.39□□□□□ -0.43
SSSCA1O60232 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.39□□□□□ -0.43
SSSCA1O60232 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SSSCA1O60232 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SSSCA1O60232 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSSCA1O60232 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SSSCA1O60232 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.39□□□□□ -0.43
SSSCA1O60232 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SSSCA1O60232 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 AL359183.1-201ENST00000623796 2132 ntBASIC12.38□□□□□ -0.43
SSSCA1O60232 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SSSCA1O60232 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 AL671277.1-201ENST00000429656 993 ntBASIC12.38□□□□□ -0.43
SSSCA1O60232 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 AC079781.3-201ENST00000449110 356 ntBASIC12.38□□□□□ -0.43
SSSCA1O60232 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SSSCA1O60232 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.38□□□□□ -0.43
SSSCA1O60232 AC015910.1-201ENST00000579400 975 ntBASIC12.38□□□□□ -0.43
SSSCA1O60232 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.38□□□□□ -0.43
SSSCA1O60232 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 LILRP1-201ENST00000444199 1370 ntBASIC12.38□□□□□ -0.43
SSSCA1O60232 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SSSCA1O60232 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSSCA1O60232 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.38□□□□□ -0.43
SSSCA1O60232 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
SSSCA1O60232 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.37□□□□□ -0.43
SSSCA1O60232 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSSCA1O60232 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms